RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SFXN2Q96NB2 322 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 COL21A1Q96P44 957 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 LRRC1Q9BTT6 524 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 PIGMQ9H3S5 423 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 BRF2Q9HAW0 419 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 ZNF225Q9UK10 706 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 UTS2RQ9UKP6 389 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 PACSIN3Q9UKS6 424 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 A0A1W2PNV4 684 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 SIAH2O43255 324 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 TSPAN2O60636 221 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 OR4F21O95013 312 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 SBK3P0C264 359 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CTAGE8P0CG41 777 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CT45A8P0DMV1 189 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CT45A9P0DMV2 189 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CHMP24386 653 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 PHBP35232 272 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 GAB1Q13480 694 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CT45A2Q5DJT8 189 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 OR5M10Q6IEU7 315 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 AAGABQ6PD74 315 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CLEC9AQ6UXN8 241 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 NPSR1Q6W5P4 371 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CTAGE4Q8IX94 777 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 CCDC116Q8IYX3 515 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 OR9A2Q8NGT5 310 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 ZNF675Q8TD23 568 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 BTBD9Q96Q07 612 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 ADOQ96SZ5 270 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 FAIM2Q9BWQ8 316 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 ACBD3Q9H3P7 528 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 C6orf203Q9P0P8 240 aaPredicted RBP14.81□□□□□ -0.04
LIG1-205ENST00000593425 DKKL1Q9UK85 242 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 PSME2Q9UL46 239 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 ZNF780BQ9Y6R6 833 aa14.81□□□□□ -0.04
LIG1-205ENST00000593425 MAP1AP78559 2803 aaPredicted RBP14.8□□□□□ -0.04
LIG1-205ENST00000593425 NIPBLQ6KC79 2804 aaeCLIP14.8□□□□□ -0.04
LIG1-205ENST00000593425 A8MT66 165 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 OTCP00480 354 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 GRK2P25098 689 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 GAS1P54826 345 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 DIO3P55073 304 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 TRA2BP62995 288 aaKnown RBP14.8□□□□□ -0.04
LIG1-205ENST00000593425 FAM27E3Q08E93 113 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 TSNAXIP1Q2TAA8 658 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 SHEQ5VZ18 495 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 VWA1Q6PCB0 445 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 RNF138Q8WVD3 245 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 ZNF592Q92610 1267 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 KAT2AQ92830 837 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 PFDN4Q9NQP4 134 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 NDRG3Q9UGV2 375 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 TRPS1Q9UHF7 1281 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 SNX6Q9UNH7 406 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 EIF3LQ9Y262 564 aaKnown RBP14.8□□□□□ -0.04
LIG1-205ENST00000593425 DLGAP4Q9Y2H0 992 aa14.8□□□□□ -0.04
LIG1-205ENST00000593425 DEFB108AA8MXU0 73 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 MSTNO14793 375 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 CASKO14936 926 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 ZIC3O60481 467 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 ABCB7O75027 752 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 ESRRBO95718 433 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 HEXAP06865 529 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 INHBAP08476 426 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 IL3P08700 152 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 CHN1P15882 459 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 CASQ1P31415 396 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 B3GALT5-AS1P59052 145 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 RAE1P78406 368 aaKnown RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 Q5PR19 223 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 SCIMPQ6UWF3 145 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 ZNF572Q7Z3I7 529 aaPredicted RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 P4HA3Q7Z4N8 544 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 RAI1Q7Z5J4 1906 aaPredicted RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 TMEM151AQ8N4L1 468 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 OR4N2Q8NGD1 307 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 EXOSC8Q96B26 276 aaKnown RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 EFHD2Q96C19 240 aaPredicted RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 STARD4Q96DR4 205 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 ARSGQ96EG1 525 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 VSTM2LQ96N03 204 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 WFIKKN1Q96NZ8 548 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 PAFAH2Q99487 392 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 C1QTNF3Q9BXJ4 246 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 FUT8Q9BYC5 575 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 MRPL46Q9H2W6 279 aaKnown RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 CDC42EP4Q9H3Q1 356 aaKnown RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 ZNF395Q9H8N7 513 aaPredicted RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 FOLH1BQ9HBA9 442 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 KLHL28Q9NXS3 571 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 MCM8Q9UJA3 840 aa14.79□□□□□ -0.04
LIG1-205ENST00000593425 MRPS18CQ9Y3D5 142 aaKnown RBP14.79□□□□□ -0.04
LIG1-205ENST00000593425 CTIFO43310 598 aaKnown RBP14.78□□□□□ -0.04
LIG1-205ENST00000593425 SMNDC1O75940 238 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIG1-205ENST00000593425 DPP4P27487 766 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 IL12BP29460 328 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 CCKARP32238 428 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 EFR3AQ14156 821 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 C8orf74Q6P047 294 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms