RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SLC22A9Q8IVM8 553 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 SLC44A2Q8IWA5 706 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-243ENST00000593128 TRIM42Q8IWZ5 723 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 GBP7Q8N8V2 638 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-243ENST00000593128 WDSUB1Q8N9V3 476 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 LINC01560Q8TB33 94 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 EFHD2Q96C19 240 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-243ENST00000593128 BBS4Q96RK4 519 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 CALHM2Q9HA72 323 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 RPH3AQ9Y2J0 694 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-243ENST00000593128 GPR55Q9Y2T6 319 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-243ENST00000593128 OR10H1Q9Y4A9 318 aa16.32■□□□□ 0.2
CIRBP-243ENST00000593128 DOCK7Q96N67 2140 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 CCDC151A5D8V7 595 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 MBD3L4A6NDZ8 208 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 MBD3L3A6NE82 208 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 OR6C70A6NIJ9 312 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 MBD3L5A6NJ08 208 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 RIPK2O43353 540 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 CRCPO75575 148 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 ABHD2P08910 425 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 ANXA4P09525 319 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 DNASE1P24855 282 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 TIA1P31483 386 aaKnown RBP eCLIP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 SLCO1A2P46721 670 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 PRKAA2P54646 552 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 FOXF2Q12947 444 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 LCP2Q13094 533 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 IMPG1Q17R60 797 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 POMZP3Q6PJE2 187 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 TIFABQ6ZNK6 161 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 TRMT10CQ7L0Y3 403 aaKnown RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 KIF18BQ86Y91 864 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 PLCZ1Q86YW0 608 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 IFT20Q8IY31 132 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 FAM9CQ8IZT9 166 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 MBD3L2Q8NHZ7 208 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 ZNF675Q8TD23 568 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 INTS12Q96CB8 462 aaKnown RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 SFXN2Q96NB2 322 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 FOLH1BQ9HBA9 442 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 MID1IP1Q9NPA3 183 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 SLC35C2Q9NQQ7 365 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 FOXD3Q9UJU5 478 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-243ENST00000593128 FBXL2Q9UKC9 423 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 STK38LQ9Y2H1 464 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 WIF1Q9Y5W5 379 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 MED12Q93074 2177 aa16.31■□□□□ 0.2
CIRBP-243ENST00000593128 TO15178 435 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 SCO2O43819 266 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 ENO1P06733 434 aaKnown RBP16.3■□□□□ 0.2
CIRBP-243ENST00000593128 CD99P14209 185 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 PKNOX1P55347 436 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 C2orf80Q0P641 193 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 EFR3AQ14156 821 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 POU4F3Q15319 338 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 FBXL19-AS1Q494R0 122 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 TMEM81Q6P7N7 255 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 SAMD14Q8IZD0 417 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-243ENST00000593128 GCNT2Q8N0V5 402 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 OR7G2Q8NG99 324 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 OR4K17Q8NGC6 315 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 OR4N2Q8NGD1 307 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 ZPLD1Q8TCW7 415 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 BTBD9Q96Q07 612 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 RHOXF2Q9BQY4 288 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 YIPF4Q9BSR8 244 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 OR2B2Q9GZK3 357 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 PSMC3IPQ9P2W1 217 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-243ENST00000593128 EDARQ9UNE0 448 aa16.3■□□□□ 0.2
CIRBP-243ENST00000593128 SPG11Q96JI7 2443 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 CLCA1A8K7I4 914 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 C17orf51A8MQB3 221 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 ABCB7O75027 752 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 JUNP05412 331 aaKnown RBP16.29■□□□□ 0.2
CIRBP-243ENST00000593128 CT45A8P0DMV1 189 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 CT45A9P0DMV2 189 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 MYL2P10916 166 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 CPN1P15169 458 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 GRK2P25098 689 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 MPIP34949 423 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 RFX3P48380 749 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 NCBP2P52298 156 aaKnown RBP eCLIP16.29■□□□□ 0.29e-14■□□□□ 9.6
CIRBP-243ENST00000593128 STX5Q13190 355 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 CT45A2Q5DJT8 189 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 TMEM107Q6UX40 140 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 NPSR1Q6W5P4 371 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 P4HA3Q7Z4N8 544 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 GRAMD2AQ8IUY3 354 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 GSPT2Q8IYD1 628 aaKnown RBP16.29■□□□□ 0.2
CIRBP-243ENST00000593128 UBQLNLQ8IYU4 475 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 CHDHQ8NE62 594 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-243ENST00000593128 NINJ1Q92982 152 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 L3HYPDHQ96EM0 354 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 SLC35A4Q96G79 324 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 FOXC2Q99958 501 aa16.29■□□□□ 0.2
CIRBP-243ENST00000593128 RBM24Q9BX46 236 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms