RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MS4A4EQ96PG1 132 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 CGREF1Q99674 301 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 PELOQ9BRX2 385 aaKnown RBP8.92□□□□□ -0.98
DDX39A-220ENST00000593008 TUBB6Q9BUF5 446 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 WWTR1Q9GZV5 400 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 NXF5Q9H1B4 397 aaKnown RBP8.92□□□□□ -0.98
DDX39A-220ENST00000593008 PIF1Q9H611 641 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 RMND5AQ9H871 391 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 NEUROD4Q9HD90 331 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 FBXO34Q9NWN3 711 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 CMTM6Q9NX76 183 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 FLRT3Q9NZU0 649 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 PTGFRNQ9P2B2 879 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 PPIEQ9UNP9 301 aaKnown RBP8.92□□□□□ -0.98
DDX39A-220ENST00000593008 PCDHGB7Q9Y5F8 929 aa8.92□□□□□ -0.98
DDX39A-220ENST00000593008 A0A087WV62 115 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 NPIPA5A0A0B4J1W7 369 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 CENPVL1A0A0U1RR11 272 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 BBIP1A8MTZ0 92 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 NPIPA7E9PJI5 369 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 PRAMEF2O60811 474 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 KCNH1O95259 989 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 NADKO95544 446 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SERPINA7P05543 415 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 NPIPA8P0DM63 369 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 OR12D1P0DN82 309 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 ICAM2P13598 275 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 UQCRC2P22695 453 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SLC6A2P23975 617 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 PRDX6P30041 224 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 ADSLP30566 484 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 CPOXP36551 454 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 TRPC1P48995 793 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 MAN2A2P49641 1150 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SLC7A2P52569 658 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RNF4P78317 190 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 IRX1P78414 480 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 FOXK1P85037 733 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 MAPK11Q15759 364 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RUNDC3AQ59EK9 446 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RPS26P11Q5JNZ5 115 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 C6orf163Q5TEZ5 329 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 PLAG1Q6DJT9 500 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SAMD14Q8IZD0 417 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RNF148Q8N7C7 305 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SLC16A11Q8NCK7 471 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 FAM156AQ8NDB6 213 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RBM15BQ8NDT2 890 aaKnown RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 CPT1CQ8TCG5 803 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SFXN5Q8TD22 340 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 TM9SF4Q92544 642 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SLC9A6Q92581 669 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 CDS1Q92903 461 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 ADIPOR1Q96A54 375 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 PNPLA2Q96AD5 504 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 LRRC58Q96CX6 371 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 NEURL3Q96EH8 262 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 NSL1Q96IY1 281 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 CLPTM1LQ96KA5 538 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 OR7D2Q96RA2 312 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 GPATCH1Q9BRR8 931 aaKnown RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 OR51I1Q9H343 314 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 TPT1P8Q9HAU6 139 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 MMP25Q9NPA2 562 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 ASH1LQ9NR48 2969 aaKnown RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RYDENQ9NUL5 291 aaKnown RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 TMEM45AQ9NWC5 275 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 ANKRD10Q9NXR5 420 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 PLA2G3Q9NZ20 509 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 MAPRE3Q9UPY8 281 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 B3GNT3Q9Y2A9 372 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 HRH3Q9Y5N1 445 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 RELNP78509 3460 aa8.91□□□□□ -0.98
DDX39A-220ENST00000593008 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
DDX39A-220ENST00000593008 UBR5O95071 2799 aaPredicted RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 NME4O00746 187 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 DYRK3O43781 588 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 CT45A8P0DMV1 189 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 CT45A9P0DMV2 189 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 ESRRAP11474 423 aaPredicted RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 GALNSP34059 522 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 MSX2P35548 267 aaPredicted RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 RFX3P48380 749 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 CLCN2P51788 898 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 NR0B1P51843 470 aaKnown RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 PSME3P61289 254 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 NCALDP61601 193 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 PSG6Q00889 435 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 INPP5JQ15735 1006 aaPredicted RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 CT45A2Q5DJT8 189 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 COQ5Q5HYK3 327 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 NANOGP8Q6NSW7 305 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 FIGNL1Q6PIW4 674 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 IGFL3Q6UXB1 125 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 ISLR2Q6UXK2 745 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 HSDL2Q6YN16 418 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 SLC44A2Q8IWA5 706 aaPredicted RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 BEST3Q8N1M1 668 aa8.9□□□□□ -0.98
DDX39A-220ENST00000593008 CISD2Q8N5K1 135 aaKnown RBP8.9□□□□□ -0.98
DDX39A-220ENST00000593008 ANKFN1Q8N957 763 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms