RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SH2D4BQ5SQS7 431 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 BEND6Q5SZJ8 279 aaPredicted RBP10.29□□□□□ -0.76
SMAD4-211ENST00000590499 HLA-DQA1Q5Y7H0 255 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 SLC22A10Q63ZE4 541 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 FAM47EQ6ZV65 393 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 CROCCP2Q86T23 111 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 TICAM1Q8IUC6 712 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 FAM9CQ8IZT9 166 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 TMEM251Q8N6I4 163 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 OR7G2Q8NG99 324 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 CDC26Q8NHZ8 85 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 KAT2AQ92830 837 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 MAGED4Q96JG8 741 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 BTBD9Q96Q07 612 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ANKRA2Q9H9E1 313 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 MIEF1Q9NQG6 463 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 GIMAP4Q9NUV9 329 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 CNIH4Q9P003 139 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PLEKHB1Q9UF11 243 aaPredicted RBP10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PRODH2Q9UF12 536 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 BCAP29Q9UHQ4 241 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ZDHHC2Q9UIJ5 367 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 TINAGQ9UJW2 476 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 ENTPD4Q9Y227 616 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 CFL2Q9Y281 166 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 TMED5Q9Y3A6 229 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 NPFFR2Q9Y5X5 522 aa10.29□□□□□ -0.76
SMAD4-211ENST00000590499 PHF3Q92576 2039 aaKnown RBP10.29□□□□□ -0.76
SMAD4-211ENST00000590499 NUP214P35658 2090 aaPredicted RBP10.29□□□□□ -0.76
SMAD4-211ENST00000590499 NOTCH2Q04721 2471 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 A0A1B0GTH9 108 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 ADAM10O14672 748 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 ACOX3O15254 700 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 BIRC5O15392 142 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 TBX19O60806 448 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 BCAS2O75934 225 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PSMG1O95456 288 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 IGHG3P01860 377 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 ABCB1P08183 1280 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 NAGAP17050 411 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 DRD5P21918 477 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PPICP45877 212 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 TMED10P49755 219 aaKnown RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 NRG3P56975 720 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 RPL38P63173 70 aaKnown RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PLGLB1Q02325 96 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PDE7AQ13946 482 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 NNATQ16517 81 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PRAMEF20Q5VT98 475 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 SLC22A16Q86VW1 577 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 NUDCD3Q8IVD9 361 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 DDIASQ8IXT1 998 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PRR22Q8IZ63 422 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 FAM109AQ8N4B1 249 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 FAM13CQ8NE31 585 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 SPPL2AQ8TCT8 520 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 AGR3Q8TD06 166 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 WFDC12Q8WWY7 111 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 HGDQ93099 445 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 ZBTB9Q96C00 473 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 HSPBAP1Q96EW2 488 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 CCDC120Q96HB5 630 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 LCORQ96JN0 433 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 C3orf30Q96M34 536 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 VSTM2LQ96N03 204 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 AMDHD1Q96NU7 426 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 ZNF703Q9H7S9 590 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 PFDN4Q9NQP4 134 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 GIMAP2Q9UG22 337 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 GPR55Q9Y2T6 319 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 LIPGQ9Y5X9 500 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.28□□□□□ -0.76
SMAD4-211ENST00000590499 MED12Q93074 2177 aa10.28□□□□□ -0.76
SMAD4-211ENST00000590499 A0A087WV62 115 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 A0A1B0GVC2 190 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 A1L4Q6 167 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 FRG2CA6NGY1 282 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CAPN14A8MX76 684 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 TMEM114B3SHH9 223 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ACOT7O00154 380 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 PLOD2O00469 737 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CCL21O00585 134 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 TP53I11O14683 189 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ITM2AO43736 263 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 NME6O75414 186 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 LYPLA1O75608 230 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 PPM1BO75688 479 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 SLITRK5O94991 958 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ZWINTO95229 277 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 LRATO95237 230 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 SERPINE1P05121 402 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 JUNP05412 331 aaKnown RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CELA3AP09093 270 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 IFI6P09912 130 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 RFPL3SP0C7P2 107 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CT45A8P0DMV1 189 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CT45A9P0DMV2 189 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 BCKDHAP12694 445 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms