RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NRG3P56975 720 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 MLF1P58340 268 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 PSPHP78330 225 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 MEP1AQ16819 746 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 RABL3Q5HYI8 236 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 CRB2Q5IJ48 1285 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 B3GNTL1Q67FW5 361 aaPredicted RBP14.04□□□□□ -0.16
ATG4D-211ENST00000589753 BORAQ6PGQ7 559 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 C16orf47Q6ZP98 133 aaPredicted RBP14.04□□□□□ -0.16
ATG4D-211ENST00000589753 RINLQ6ZS11 566 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 CCDC121Q6ZUS5 278 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 PGAM4Q8N0Y7 254 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 TAGAPQ8N103 731 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 RBM15BQ8NDT2 890 aaKnown RBP14.04□□□□□ -0.16
ATG4D-211ENST00000589753 SLC22A8Q8TCC7 542 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 XAGE5Q8WWM1 108 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 PIK3R3Q92569 461 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 CDS1Q92903 461 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 RAB8BQ92930 207 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 TMEM125Q96AQ2 219 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 HSPBAP1Q96EW2 488 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 SLC35A4Q96G79 324 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 ZNF354BQ96LW1 612 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 THUMPD1Q9NXG2 353 aaKnown RBP14.04□□□□□ -0.16
ATG4D-211ENST00000589753 GPR83Q9NYM4 423 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 L3MBTL1Q9Y468 752 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 APC2O95996 2303 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 ASPMQ8IZT6 3477 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 TO15178 435 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 MAN1A2O60476 641 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 HNRNPCL1O60812 293 aaKnown RBP14.03□□□□□ -0.16
ATG4D-211ENST00000589753 ITGA10O75578 1167 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 TRHRP34981 398 aaPredicted RBP14.03□□□□□ -0.16
ATG4D-211ENST00000589753 SOX11P35716 441 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 CPOXP36551 454 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 SLC7A2P52569 658 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 DSTNP60981 165 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 POU6F2P78424 691 aaPredicted RBP14.03□□□□□ -0.16
ATG4D-211ENST00000589753 RAPSNQ13702 412 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 CYP27C1Q4G0S4 372 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 PIGGQ5H8A4 983 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 ACER2Q5QJU3 275 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 ATAD3BQ5T9A4 648 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 AGAP7PQ5VUJ5 663 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 DEFB107AQ8IZN7 70 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 SLC15A4Q8N697 577 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 COX18Q8N8Q8 333 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 OR4N2Q8NGD1 307 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 AGAP4Q96P64 663 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 ECSITQ9BQ95 431 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 BTBD2Q9BX70 525 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 C1orf21Q9H246 121 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 KAT8Q9H7Z6 458 aaKnown RBP14.03□□□□□ -0.16
ATG4D-211ENST00000589753 SPAG4Q9NPE6 437 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 EXD2Q9NVH0 621 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 CBLCQ9ULV8 474 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 AP3M1Q9Y2T2 418 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 YARS2Q9Y2Z4 477 aaKnown RBP14.03□□□□□ -0.16
ATG4D-211ENST00000589753 KCNE3Q9Y6H6 103 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 URB1O60287 2271 aaKnown RBP14.03□□□□□ -0.16
ATG4D-211ENST00000589753 FRYQ5TBA9 3013 aa14.03□□□□□ -0.16
ATG4D-211ENST00000589753 GXYLT2A0PJZ3 443 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 A8MVJ9 347 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 TNFRSF21O75509 655 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 CEACAM4O75871 244 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 NADKO95544 446 aaPredicted RBP14.02□□□□□ -0.17
ATG4D-211ENST00000589753 BMP2P12643 396 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 RASSF2P50749 326 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 PLCXD2Q0VAA5 305 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 TBR1Q16650 682 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 DECR1Q16698 335 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 GCNT6Q5T4J0 391 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 ABHD17BQ5VST6 288 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 C16orf62Q7Z3J2 963 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 SLC15A3Q8IY34 581 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 SLC34A3Q8N130 599 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 C10orf111Q8N326 155 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 FDCSPQ8NFU4 85 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 OR10A6Q8NH74 314 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 RMND5BQ96G75 393 aaPredicted RBP14.02□□□□□ -0.17
ATG4D-211ENST00000589753 RASL10BQ96S79 203 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 RYDENQ9NUL5 291 aaKnown RBP14.02□□□□□ -0.17
ATG4D-211ENST00000589753 TAS2R1Q9NYW7 299 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 STMN3Q9NZ72 180 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 ABI3Q9P2A4 366 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 ABCD2Q9UBJ2 740 aa14.02□□□□□ -0.17
ATG4D-211ENST00000589753 MRTO4Q9UKD2 239 aaKnown RBP14.02□□□□□ -0.17
ATG4D-211ENST00000589753 NME4O00746 187 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 GYG2O15488 501 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 ZNF354AO60765 605 aaPredicted RBP14.01□□□□□ -0.17
ATG4D-211ENST00000589753 KCNK2O95069 426 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 AK1P00568 194 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 ITGB2P05107 769 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 NUDT7P0C024 238 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 ABCD3P28288 659 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 KRT20P35900 424 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 PIGAP37287 484 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 SSR4P51571 173 aa14.01□□□□□ -0.17
ATG4D-211ENST00000589753 MRPS22P82650 360 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms