RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 ICOSLGO75144 302 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 SPAG7O75391 227 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 REM1O75628 298 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 GLI4P10075 376 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 PRF1P14222 555 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 IL12BP29460 328 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 MC3RP41968 323 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 TRPC1P48995 793 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 PNLIPRP2P54317 469 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 CORO7P57737 925 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 CRYZQ08257 329 aaKnown RBP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 ARL13AQ5H913 290 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 NHSL2Q5HYW2 709 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 RTL6Q6ICC9 239 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 PM20D2Q8IYS1 436 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 ULK2Q8IYT8 1036 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 ACBD4Q8NC06 268 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 TWIST2Q8WVJ9 160 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 AMDHD1Q96NU7 426 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 MECRQ9BV79 373 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 TUBB1Q9H4B7 451 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 GLIPR2Q9H4G4 154 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 KCNJ16Q9NPI9 418 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 DDX18Q9NVP1 670 aaKnown RBP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 C19orf53Q9UNZ5 99 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 TRAF6Q9Y4K3 522 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 PTGDR2Q9Y5Y4 395 aa13.2□□□□□ -0.3
DDX39A-208ENST00000588692 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-208ENST00000588692 HCFC1P51610 2035 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 AHRRA9YTQ3 701 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 GNB5O14775 395 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 LSM1O15116 133 aaKnown RBP13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TSPAN2O60636 221 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TBX19O60806 448 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 PSMG1O95456 288 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 CHRNGP07510 517 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 LINC00032P0C843 101 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TACR1P25103 407 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 GCKP35557 465 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 PTGDSP41222 190 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 KIR3DL1P43629 444 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 RPL38P63173 70 aaKnown RBP13.19□□□□□ -0.3
DDX39A-208ENST00000588692 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.36e-8■■■□□ 18.1
DDX39A-208ENST00000588692 PRSS53Q2L4Q9 553 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TMEM107Q6UX40 140 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 NPSR1Q6W5P4 371 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-208ENST00000588692 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-208ENST00000588692 DDIASQ8IXT1 998 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 OR10Q1Q8NGQ4 319 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 EGLN2Q96KS0 407 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TREX2Q9BQ50 279 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-208ENST00000588692 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 GALNT9Q9HCQ5 603 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 ALKBH4Q9NXW9 302 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 OR10H1Q9Y4A9 318 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 MYO9AB2RTY4 2548 aa13.19□□□□□ -0.3
DDX39A-208ENST00000588692 TTC36A6NLP5 189 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 FAM90A27PA6NNH2 459 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 UPK1AO00322 258 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 PDPK1O15530 556 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 TYROBPO43914 113 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 CBR3O75828 277 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 TUBBP07437 444 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 SNRPB2P08579 225 aaKnown RBP13.18□□□□□ -0.3
DDX39A-208ENST00000588692 DDX5P17844 614 aaKnown RBP13.18□□□□□ -0.3
DDX39A-208ENST00000588692 SDC1P18827 310 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 ASMTP46597 345 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 ZFP36L2P47974 494 aaKnown RBP13.18□□□□□ -0.3
DDX39A-208ENST00000588692 PSG6Q00889 435 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 PDE7AQ13946 482 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 TOMM20Q15388 145 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 ZNHIT3Q15649 155 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-208ENST00000588692 UGT3A2Q3SY77 523 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 RFTN2Q52LD8 501 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-208ENST00000588692 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 RIPPLY2Q5TAB7 128 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 VASNQ6EMK4 673 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 DESI1Q6ICB0 168 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 LARP4Q71RC2 724 aaKnown RBP eCLIP13.18□□□□□ -0.35e-6■■■□□ 15.1
DDX39A-208ENST00000588692 ZFP28Q8NHY6 868 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 MTERF3Q96E29 417 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 ELP4Q96EB1 424 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 PPP3R2Q96LZ3 170 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 TIMP4Q99727 224 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 PRDM14Q9GZV8 571 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 REEP4Q9H6H4 257 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
DDX39A-208ENST00000588692 A0A0G2JNJ9 132 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 TMEM114B3SHH9 223 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 TMEM233B4DJY2 109 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms