RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 POLR3GO15318 223 aaPredicted RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 TSPAN2O60636 221 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 UGT2B11O75310 529 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 WISP1O95388 367 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 ZFP36L2P47974 494 aaKnown RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 UQCRFS1P47985 274 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 DNASE1L1P49184 302 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 GUCY1A3Q02108 690 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 FOXO1Q12778 655 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 MRPL49Q13405 166 aaKnown RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 GAB1Q13480 694 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 FAM174BQ3ZCQ3 159 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 EXOSC6Q5RKV6 272 aaKnown RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 PRAMEF20Q5VT98 475 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 RFWD2Q8NHY2 731 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 SPPL2AQ8TCT8 520 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 NTNG2Q96CW9 530 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 THOC1Q96FV9 657 aaKnown RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 MS4A4EQ96PG1 132 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 SECISBP2Q96T21 854 aaKnown RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 FAM173AQ9BQD7 235 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 CCDC134Q9H6E4 229 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 NEUROD4Q9HD90 331 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 SDR39U1Q9NRG7 319 aaPredicted RBP18.56■□□□□ 0.56
DDX39A-207ENST00000588542 VPS4AQ9UN37 437 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 SNX8Q9Y5X2 465 aa18.56■□□□□ 0.56
DDX39A-207ENST00000588542 PRSS51A0A1B0GVH4 220 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 DYNC1I1O14576 645 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 TP53I11O14683 189 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 EDN3P14138 238 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 GNLYP22749 145 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 S100A3P33764 101 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
DDX39A-207ENST00000588542 DGKQP52824 942 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 PRR5P85299 388 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ALDH6A1Q02252 535 aaKnown RBP18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ANXA8L1Q5VT79 327 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 BICRALQ6AI39 1079 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 MFSD12Q6NUT3 480 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 NUP54Q7Z3B4 507 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 SZRD1Q7Z422 152 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ANKRD46Q86W74 232 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ATCAYQ86WG3 371 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ST6GALNAC3Q8NDV1 305 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 STON2Q8WXE9 905 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 SLC35A4Q96G79 324 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 C16orf58Q96GQ5 468 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 NODALQ96S42 347 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 NPHS2Q9NP85 383 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ZCCHC3Q9NUD5 404 aaKnown RBP18.55■□□□□ 0.56
DDX39A-207ENST00000588542 TUBA8Q9NY65 449 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ZIM2Q9NZV7 527 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 GTF3C1Q12789 2109 aa18.55■□□□□ 0.56
DDX39A-207ENST00000588542 ANKRD33BA6NCL7 494 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 OR6C70A6NIJ9 312 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 TTC36A6NLP5 189 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 CFLARO15519 480 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 REM1O75628 298 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 SLC22A3O75751 556 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 GLSO94925 669 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 NKX2-2O95096 273 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 HMGN2P05204 90 aaKnown RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 ACP2P11117 423 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 CASP3P42574 277 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 MRPL19P49406 292 aaKnown RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 PSPHP78330 225 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 ZNHIT3Q15649 155 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 CYP27C1Q4G0S4 372 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 TMEM81Q6P7N7 255 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 CDRT4Q8N9R6 151 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 GLB1L3Q8NCI6 653 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 SLC16A11Q8NCK7 471 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 SFXN5Q8TD22 340 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 DIO2Q92813 273 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 COL21A1Q96P44 957 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 ADOQ96SZ5 270 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 TSPAN10Q9H1Z9 355 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 FAM120CQ9NX05 1096 aaKnown RBP18.54■□□□□ 0.56
DDX39A-207ENST00000588542 CBLCQ9ULV8 474 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 OR10H1Q9Y4A9 318 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 POLEQ07864 2286 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 ZNF407Q9C0G0 2248 aa18.54■□□□□ 0.56
DDX39A-207ENST00000588542 GXYLT2A0PJZ3 443 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 PGRP06401 933 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 ZNF24P17028 368 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 GABRA3P34903 492 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 MDH1P40925 334 aaKnown RBP18.53■□□□□ 0.56
DDX39A-207ENST00000588542 PNLIPRP2P54317 469 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 ZCCHC12Q6PEW1 402 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 PAOXQ6QHF9 649 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 GK5Q6ZS86 529 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 MIER2Q8N344 545 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 OR56A1Q8NGH5 318 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 OR4A15Q8NGL6 344 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 OR9I1Q8NGQ6 314 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 OR5AK3PQ8NH89 298 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 FBXO30Q8TB52 745 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 PIK3R3Q92569 461 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 MOAP1Q96BY2 351 aa18.53■□□□□ 0.56
DDX39A-207ENST00000588542 EFHD2Q96C19 240 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms