RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 GALNT18Q6P9A2 607 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 SCIMPQ6UWF3 145 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 NPSR1Q6W5P4 371 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 ACMSDQ8TDX5 336 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 ERP27Q96DN0 273 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 SLC35A4Q96G79 324 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 VSTM2LQ96N03 204 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 POLDIP3Q9BY77 421 aaKnown RBP17.09■□□□□ 0.33
TRIM47-205ENST00000587774 TXLNGYQ9BZA5 131 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 OR2B2Q9GZK3 357 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 SLC35C2Q9NQQ7 365 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 EMCNQ9ULC0 261 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 WIF1Q9Y5W5 379 aa17.09■□□□□ 0.33
TRIM47-205ENST00000587774 UBFD1O14562 309 aaKnown RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 TSPAN2O60636 221 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 ERN1O75460 977 aaKnown RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 REM1O75628 298 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 BCAS2O75934 225 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 CD1EP15812 388 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 PEX19P40855 299 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 SLCO1A2P46721 670 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 AGFG1P52594 562 aaKnown RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 BTKQ06187 659 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 RCAN2Q14206 197 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 ERCC6LQ2NKX8 1250 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 IFNEQ86WN2 208 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 GSPT2Q8IYD1 628 aaKnown RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 SAMD14Q8IZD0 417 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 CEP112Q8N8E3 955 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 C9orf106Q8NAJ2 232 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 OR7G2Q8NG99 324 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 OR14L1PQ8NHC6 308 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 RDH11Q8TC12 318 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 TMCO6Q96DC7 493 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 LRRC46Q96FV0 321 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 ADOQ96SZ5 270 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 CLEC4MQ9H2X3 399 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-205ENST00000587774 FOLH1BQ9HBA9 442 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 MID1IP1Q9NPA3 183 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 GIMAP4Q9NUV9 329 aa17.08■□□□□ 0.32
TRIM47-205ENST00000587774 KIF2AO00139 706 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-205ENST00000587774 ABCB7O75027 752 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 CBR3O75828 277 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 ANXA4P09525 319 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-205ENST00000587774 CYP4B1P13584 511 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 TACR1P25103 407 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 IL12BP29460 328 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 GCKP35557 465 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 IST1P53990 364 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 ZNF763Q0D2J5 394 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 PLCZ1Q86YW0 608 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 FAM9CQ8IZT9 166 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 CCNYL1Q8N7R7 359 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 CDC26Q8NHZ8 85 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 ZPLD1Q8TCW7 415 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 TUBA1CQ9BQE3 449 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 LIME1Q9H400 295 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 CALHM2Q9HA72 323 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 RASSF1Q9NS23 344 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 SENP1Q9P0U3 644 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 FOXD3Q9UJU5 478 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-205ENST00000587774 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 CBLCQ9ULV8 474 aa17.07■□□□□ 0.32
TRIM47-205ENST00000587774 NIPBLQ6KC79 2804 aaeCLIP17.07■□□□□ 0.32
TRIM47-205ENST00000587774 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 SERTM1A2A2V5 107 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 FAM221AA4D161 298 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 A6NNC1 897 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 B4DXG7 233 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 EEF1E1-BLOC1S5C9J1V9 151 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 G3V2L1 256 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 H0Y3Z8 333 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 EEF1E1O43324 174 aaKnown RBP17.06■□□□□ 0.32
TRIM47-205ENST00000587774 PLOD3O60568 738 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 CPN1P15169 458 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 CTSSP25774 331 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 GFRA1P56159 465 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 PRSS53Q2L4Q9 553 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 SPDYAQ5MJ70 313 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 PLXDC2Q6UX71 529 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 TRIM42Q8IWZ5 723 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 OR4N2Q8NGD1 307 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 FAM222BQ8WU58 562 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 RNF138Q8WVD3 245 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 EFHD2Q96C19 240 aaPredicted RBP17.06■□□□□ 0.32
TRIM47-205ENST00000587774 SIRT5Q9NXA8 310 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 TAS2R10Q9NYW0 307 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 DCDC2Q9UHG0 476 aa17.06■□□□□ 0.32
TRIM47-205ENST00000587774 C17orf51A8MQB3 221 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 GLRA3O75311 464 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 TMIGD3P0DMS9 266 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-205ENST00000587774 MYL2P10916 166 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 DDCP20711 480 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 SRD5A2P31213 254 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 MPIP34949 423 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 OPRM1P35372 400 aa17.05■□□□□ 0.32
TRIM47-205ENST00000587774 KRT20P35900 424 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms