RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 AMZ1Q400G9 498 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 FHL5Q5TD97 284 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 AP1ARQ63HQ0 302 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 HEPHL1Q6MZM0 1159 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 MFSD12Q6NUT3 480 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 TMEM154Q6P9G4 183 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 TBPL2Q6SJ96 375 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 PRSS41Q7RTY9 318 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 C16orf62Q7Z3J2 963 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ST13P4Q8IZP2 240 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 Q8N9G6 341 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 OR7G2Q8NG99 324 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 KAT2AQ92830 837 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 FGF11Q92914 225 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 CCDC74AQ96AQ1 378 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 CTHRC1Q96CG8 243 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 GIMAP5Q96F15 307 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 CNBD2Q96M20 576 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 OR1F2PQ96R84 312 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 PIP5K1AQ99755 562 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 PINK1Q9BXM7 581 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 SPRTNQ9H040 489 aaPredicted RBP9.71□□□□□ -0.86
LIG3-203ENST00000585370 PIGUQ9H490 435 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 SERHL2Q9H4I8 314 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 PRORYQ9H606 182 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 POLE3Q9NRF9 147 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 PRTFDC1Q9NRG1 225 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 DUSP22Q9NRW4 184 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 CUTCQ9NTM9 273 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 NDUFAF4Q9P032 175 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ABCG2Q9UNQ0 655 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 SLC9A8Q9Y2E8 581 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 IFT52Q9Y366 437 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 MMACHCQ9Y4U1 282 aa9.71□□□□□ -0.86
LIG3-203ENST00000585370 LY6G6EA0A0G2JKS1 128 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ARRDC5A6NEK1 342 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 TMEM150CB9EJG8 249 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 FAM227AF5H4B4 570 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 TNFRSF11BO00300 401 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SLC16A6O15403 523 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ZNF749O43361 778 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 HS6ST1O60243 411 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 OR10H2O60403 315 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 LDB3O75112 727 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 CPNE6O95741 557 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 MT-CO3P00414 261 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 UBTFL6P0CB48 400 aaPredicted RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 CKMT1AP12532 417 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 XCR1P46094 333 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SNRPNP63162 240 aaKnown RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 HPCAP84074 193 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ACY1Q03154 408 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 CFHR1Q03591 330 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 STX4Q12846 297 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SLC13A2Q13183 592 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 MAPK11Q15759 364 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 PRICKLE4Q2TBC4 344 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ARHGAP11BQ3KRB8 267 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 GPAT3Q53EU6 434 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 EXOSC6Q5RKV6 272 aaKnown RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 CDCP2Q5VXM1 449 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 LRRC69Q6ZNQ3 347 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 USP51Q70EK9 711 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 GALNT10Q86SR1 603 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 BPHLQ86WA6 291 aaPredicted RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 SLC44A2Q8IWA5 706 aaPredicted RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 LINC00471Q8N535 108 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 CHDHQ8NE62 594 aaPredicted RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 OR4D9Q8NGE8 314 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 OR10Q1Q8NGQ4 319 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 OR51Q1Q8NH59 317 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 GIPC3Q8TF64 312 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 CYGBQ8WWM9 190 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 MMABQ96EY8 250 aaPredicted RBP9.7□□□□□ -0.86
LIG3-203ENST00000585370 SLC35A4Q96G79 324 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 C16orf58Q96GQ5 468 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 COL21A1Q96P44 957 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 PSD2Q9BQI7 771 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 NDC1Q9BTX1 674 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ZNF696Q9H7X3 374 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 UBAP1Q9NZ09 502 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ENOPH1Q9UHY7 261 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SLC13A4Q9UKG4 626 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SRPK3Q9UPE1 567 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 SATB2Q9UPW6 733 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 U3KQA8 63 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 ZNF462Q96JM2 2506 aa9.7□□□□□ -0.86
LIG3-203ENST00000585370 PRAMEF27A3QJZ7 478 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 CPED1A4D0V7 1026 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 H3BMH7 237 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 DSCR3O14972 297 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 RRP8O43159 456 aaKnown RBP9.69□□□□□ -0.86
LIG3-203ENST00000585370 DYRK3O43781 588 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 JRKO75564 520 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 SNAP29O95721 258 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 LGI1O95970 557 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms