RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DLGAP4Q9Y2H0 992 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
VAPA-209ENST00000585042 NAV3Q8IVL0 2385 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 A8MXE2 369 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 H0Y3Z8 333 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 REM1O75628 298 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 KRT6AP02538 564 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 KRT6BP04259 564 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 HSD17B3P37058 310 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 GSTM5P46439 218 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 KRT6CP48668 564 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 PNLIPRP2P54317 469 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 MRPS22P82650 360 aaKnown RBP13.63□□□□□ -0.23
VAPA-209ENST00000585042 CSTF3Q12996 717 aaKnown RBP13.63□□□□□ -0.23
VAPA-209ENST00000585042 LETMD1Q6P1Q0 360 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 BIVMQ86UB2 503 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 LCA5Q86VQ0 697 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 TMEM151AQ8N4L1 468 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 C1orf52Q8N6N3 182 aaKnown RBP13.63□□□□□ -0.23
VAPA-209ENST00000585042 ADCY4Q8NFM4 1077 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 RNF138Q8WVD3 245 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 L2HGDHQ9H9P8 463 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 GALNT9Q9HCQ5 603 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 BEX4Q9NWD9 120 aaPredicted RBP13.63□□□□□ -0.23
VAPA-209ENST00000585042 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 UTS2RQ9UKP6 389 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 MAPRE3Q9UPY8 281 aa13.63□□□□□ -0.23
VAPA-209ENST00000585042 KIAA1549Q9HCM3 1950 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 SH3D21A4FU49 640 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 MSTNO14793 375 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 CASKO14936 926 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 TSPAN2O60636 221 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 HRGP04196 525 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 CT45A8P0DMV1 189 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 CT45A9P0DMV2 189 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 PCSK2P16519 638 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 KRT20P35900 424 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 ALDH9A1P49189 494 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 LHX2P50458 406 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 FOXF2Q12947 444 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 HEPACAMQ14CZ8 416 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 RASA2Q15283 850 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 NNATQ16517 81 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 ERCC6LQ2NKX8 1250 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 CT45A2Q5DJT8 189 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 ZNF628Q5EBL2 1059 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 LGSNQ5TDP6 509 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 DESI1Q6ICB0 168 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 OR2A2Q6IF42 318 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 CCDC116Q8IYX3 515 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 SIMC1Q8NDZ2 872 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 TMBIM1Q969X1 311 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 PAFAH2Q99487 392 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 G6PC3Q9BUM1 346 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 STMN4Q9H169 189 aaPredicted RBP13.62□□□□□ -0.23
VAPA-209ENST00000585042 GALNT8Q9NY28 637 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 ZNF225Q9UK10 706 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 WIF1Q9Y5W5 379 aa13.62□□□□□ -0.23
VAPA-209ENST00000585042 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
VAPA-209ENST00000585042 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 A8MT66 165 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 LINC01387J3KSC0 135 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 MANBAO00462 879 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 PLOD2O00469 737 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 PPP6CO00743 305 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 HCRTR2O43614 444 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
VAPA-209ENST00000585042 ZIC3O60481 467 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 PLOD3O60568 738 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 ULK1O75385 1050 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 ZNF708P17019 499 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 CD53P19397 219 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 TAC1P20366 129 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 MPIP34949 423 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 CPA2P48052 419 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 CDH13P55290 713 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 SRYQ05066 204 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 CLCQ05315 142 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 DUSP2Q05923 314 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 SPIN4Q56A73 249 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 SHEQ5VZ18 495 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 MMP21Q8N119 569 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 INTS12Q96CB8 462 aaKnown RBP13.61□□□□□ -0.23
VAPA-209ENST00000585042 VSTM2LQ96N03 204 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 ADOQ96SZ5 270 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 CDC42EP4Q9H3Q1 356 aaKnown RBP13.61□□□□□ -0.23
VAPA-209ENST00000585042 SIRT5Q9NXA8 310 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 TAS2R9Q9NYW1 312 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 EHD3Q9NZN3 535 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 PACSIN3Q9UKS6 424 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 EIF3LQ9Y262 564 aaKnown RBP13.61□□□□□ -0.23
VAPA-209ENST00000585042 STK38LQ9Y2H1 464 aa13.61□□□□□ -0.23
VAPA-209ENST00000585042 A0A087WUV0 522 aaPredicted RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 SERTM1A2A2V5 107 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 SLITRK5O94991 958 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 OR4F21O95013 312 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms