RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 FNDC7Q5VTL7 733 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 TIGD3Q6B0B8 471 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 LRRC34Q8IZ02 419 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 OR7G2Q8NG99 324 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 HOXB13Q92826 284 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 ZBED6CLQ96FA7 236 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 COL21A1Q96P44 957 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 OSBPL11Q9BXB4 747 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 GLIPR2Q9H4G4 154 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 LDAHQ9H6V9 325 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 METTL7AQ9H8H3 244 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 FOLH1BQ9HBA9 442 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 HHATLQ9HCP6 504 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 NTMQ9P121 344 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 LIPGQ9Y5X9 500 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 ATP6AP2A0A1C7CYW4 349 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 CYSRT1A8MQ03 144 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 PIP5K1BO14986 540 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 SNPHO15079 494 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 PDPK1O15530 556 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 TSPAN2O60636 221 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 LYPLA1O75608 230 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 ATP6AP2O75787 350 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 SERPINE1P05121 402 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 RFPL3SP0C7P2 107 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 GRK2P25098 689 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 ACVR2AP27037 513 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 GDF1P27539 372 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 CHRNB4P30926 498 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 SERPINB4P48594 390 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 MASP1P48740 699 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 CDK9P50750 372 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 MAD2L1Q13257 205 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 SF3B4Q15427 424 aaKnown RBP eCLIP15.34■□□□□ 0.051e-18■■■■■ 35
CSNK1D-225ENST00000584913 CYP27C1Q4G0S4 372 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 GXYLT1Q4G148 440 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 RFTN2Q52LD8 501 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 FAM180BQ6P0A1 224 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 DDIASQ8IXT1 998 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 PM20D2Q8IYS1 436 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 LIX1Q8N485 282 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 CDC26Q8NHZ8 85 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 KAT2AQ92830 837 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 ELP4Q96EB1 424 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 CCDC134Q9H6E4 229 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 DDX18Q9NVP1 670 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 ASIC5Q9NY37 505 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 MRTO4Q9UKD2 239 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 MAPRE3Q9UPY8 281 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 MAST4O15021 2626 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 GTF3C1Q12789 2109 aa15.34■□□□□ 0.05
CSNK1D-225ENST00000584913 PRAMEF25A6NGN4 478 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 NPIPA2E9PIF3 369 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 NPIPA3F8WFD2 350 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 UGT2B11O75310 529 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PDE9AO76083 593 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 JUNP05412 331 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 LINC00032P0C843 101 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PRPS2P11908 318 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 ENDOUP21128 410 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 TACR1P25103 407 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 HTR1EP28566 365 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PTPN6P29350 595 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 MC3RP41968 323 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PSMD4P55036 377 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 C21orf58P58505 322 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 GNGT1P63211 74 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PSG6Q00889 435 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 ZNHIT3Q15649 155 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 ATP6AP1LQ52LC2 224 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 TMEM64Q6YI46 380 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 B3GNT6Q6ZMB0 384 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 NUDCD3Q8IVD9 361 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PRR22Q8IZ63 422 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 ACBD4Q8NC06 268 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 SIMC1Q8NDZ2 872 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 OR5M3Q8NGP4 307 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 RND1Q92730 232 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PPCDCQ96CD2 204 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 EGLN2Q96KS0 407 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 LMF2Q9BU23 707 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 C3orf14Q9HBI5 128 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 ATP6V1HQ9UI12 483 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 HAO1Q9UJM8 370 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 ABCG2Q9UNQ0 655 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 MRPS18CQ9Y3D5 142 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 PTGDR2Q9Y5Y4 395 aa15.33■□□□□ 0.04
CSNK1D-225ENST00000584913 UPK1AO00322 258 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 ICOSLGO75144 302 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 CBR3O75828 277 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 CELA3AP09093 270 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 BCKDHAP12694 445 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 IL12BP29460 328 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 LCN1P31025 176 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 ARRB2P32121 409 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 HPCAL1P37235 193 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 PTGDSP41222 190 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 GUCY1A3Q02108 690 aa15.32■□□□□ 0.04
CSNK1D-225ENST00000584913 ZNF155Q12901 538 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms