RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 WDR53Q7Z5U6 358 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TIGD4Q8IY51 512 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 YAF2Q8IY57 180 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SVOPQ8N4V2 548 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OR8J2Q8NGG1 315 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C7orf34Q96L11 122 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DUSP26Q9BV47 211 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RDH14Q9HBH5 336 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C11orf16Q9NQ32 467 aa10.96□□□□□ -0.66
CDK5RAP3-231ENST00000584063 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 AGAP5A6NIR3 686 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SCN2BO60939 215 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IL1AP01583 271 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ANXA4P09525 319 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RHCEP18577 417 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SOX3P41225 446 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SOX9P48436 509 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CSNK1DP48730 415 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CAPZA1P52907 286 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRRX1P54821 245 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LTB4RQ15722 352 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GDPD3Q7L5L3 318 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SULF2Q8IWU5 870 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OR10G2Q8NGC3 310 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OR4A15Q8NGL6 344 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NFKBIDQ8NI38 313 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PHF10Q8WUB8 498 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FBLIM1Q8WUP2 373 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RSC1A1Q92681 617 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ECHDC3Q96DC8 303 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OTUB1Q96FW1 271 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 VRK1Q99986 396 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C17orf62Q9BQA9 187 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CNPPD1Q9BV87 410 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRRG3Q9BZD7 231 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SFXN1Q9H9B4 322 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DNAJC11Q9NVH1 559 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IMPAD1Q9NX62 359 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C5AR2Q9P296 337 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NUMA1Q14980 2115 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OBSL1O75147 1896 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 A4D1N5 150 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C22orf46C9J442 243 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 F8W036 122 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SMAD7O15105 426 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 BET1O15155 118 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC16A8O95907 504 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C9P02748 559 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PKLRP30613 574 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SOAT1P35610 550 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RAB15P59190 212 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 POLR2LP62875 67 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DLX2Q07687 328 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 KEAP1Q14145 624 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ADIPOQQ15848 244 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF385BQ569K4 471 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CBLL1Q75N03 491 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 EIF3MQ7L2H7 374 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LGI4Q8N135 537 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TMEM203Q969S6 136 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OPN3Q9H1Y3 402 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SGK2Q9HBY8 427 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CTPS2Q9NRF8 586 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GIMAP4Q9NUV9 329 aa10.95□□□□□ -0.66
CDK5RAP3-231ENST00000584063 METTL15A6NJ78 407 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 K7ESM1 405 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ASNA1O43681 348 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 KIAA0513O60268 411 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TGFB1P01137 390 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ADORA3P0DMS8 318 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IFITM2Q01629 132 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GPAT3Q53EU6 434 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC36A4Q6YBV0 504 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF605Q86T29 641 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 THOC6Q86W42 341 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 B3GNT7Q8NFL0 401 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 AKR7LQ8NHP1 331 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GTF3AQ92664 365 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CMTM7Q96FZ5 175 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC29A3Q9BZD2 475 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SPNS1Q9H2V7 528 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NRIP3Q9NQ35 241 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NDUFAF4Q9P032 175 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 VPS29Q9UBQ0 182 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RAB23Q9ULC3 237 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MTCL1Q9Y4B5 1905 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 A0A1W2PN81 502 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OR5K3A6NET4 321 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MGAT4DA6NG13 374 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TMEM229AB2RXF0 380 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C6orf47O95873 294 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DHFRP00374 187 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 EPHX1P07099 455 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CHRNA7P36544 502 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RAE1P78406 368 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IL18R1Q13478 541 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IRF3Q14653 427 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms