RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TTC36A6NLP5 189 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DUXAA6NLW8 204 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HMGN4O00479 90 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PEX12O00623 359 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ASNA1O43681 348 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DNAJA2O60884 412 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NKX2-2O95096 273 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ALOX5P09917 674 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NUDT7P0C024 238 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ACP2P11117 423 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ICAM2P13598 275 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 WT1P19544 449 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 KHKP50053 298 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ANXA11P50995 505 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CLCN2P51788 898 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DSTNP60981 165 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GCNT6Q5T4J0 391 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 WDR53Q7Z5U6 358 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 IFNEQ86WN2 208 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 C9orf40Q8IXQ3 194 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 LGI4Q8N135 537 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 RNF148Q8N7C7 305 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZSCAN1Q8NBB4 408 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR5D16Q8NGK9 328 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR8K3Q8NH51 312 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 XAGE5Q8WWM1 108 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC9A6Q92581 669 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 RAB8BQ92930 207 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MCUR1Q96AQ8 359 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 REXO5Q96IC2 774 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 STACQ99469 402 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SPATA9Q9BWV2 254 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PIGUQ9H490 435 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ALG2Q9H553 416 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TMEM38AQ9H6F2 299 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZNF160Q9HCG1 818 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MMP25Q9NPA2 562 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 WDR70Q9NW82 654 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 THUMPD1Q9NXG2 353 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 FBXL4Q9UKA2 621 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 USP22Q9UPT9 525 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GPR55Q9Y2T6 319 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 KCNE3Q9Y6H6 103 aa15.16■□□□□ 0.02
CDK5RAP3-228ENST00000583363 C2orf92A0A1B0GVN3 265 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 FAM220BPB1ANY3 271 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NKX2-8O15522 239 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZFAND5O76080 213 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 AGR2O95994 175 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CT45A8P0DMV1 189 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CT45A9P0DMV2 189 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DRD5P21918 477 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ME2P23368 584 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HTR1EP28566 365 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GABRA3P34903 492 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PPICP45877 212 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TMPRSS3P57727 454 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DCAF7P61962 342 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 KCNJ2P63252 427 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 RNF4P78317 190 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PSG6Q00889 435 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZNF155Q12901 538 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DUSP5Q16690 384 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 BTBD16Q32M84 506 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CT45A2Q5DJT8 189 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HSDL2Q6YN16 418 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC29A4Q7RTT9 530 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PTOV1Q86YD1 416 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZZZ3Q8IYH5 903 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ULK2Q8IYT8 1036 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR2T12Q8NG77 320 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 UTP4Q969X6 686 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OTUB1Q96FW1 271 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ITPAQ9BY32 194 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DUSP22Q9NRW4 184 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TRBV11-1A0A0K0K1C0 115 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ELOVL7A1L3X0 281 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PRAMEF27A3QJZ7 478 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CDC14CA4D256 554 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 J3QKU1 62 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 KLK10O43240 276 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 EFSO43281 561 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PRKNO60260 465 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PDE5AO76074 875 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SORBS2O94875 1100 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TFPTP0C1Z6 253 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ARAFP10398 606 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 NQO1P15559 274 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 RHDQ02161 417 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 RBBP4Q09028 425 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 Q0VFX4 171 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ATP1A4Q13733 1029 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 EBPQ15125 230 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ZNHIT3Q15649 155 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MAPK11Q15759 364 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CYP51A1Q16850 503 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CRTC2Q53ET0 693 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 BROXQ5VW32 411 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 HEPHL1Q6MZM0 1159 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms