RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SNX10	Q9Y5X0	201 aa		2.88	□□□□□ -1.95
MSI2-215	ENST00000582453	TRIP11	Q15643	1979 aa		2.88	□□□□□ -1.95
MSI2-215	ENST00000582453	NUP210	Q8TEM1	1887 aa	Predicted RBP	2.88	□□□□□ -1.95
MSI2-215	ENST00000582453	NCOR1	O75376	2440 aa		2.88	□□□□□ -1.95
MSI2-215	ENST00000582453	MTCL1	Q9Y4B5	1905 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453		A0A1W2PPK0	400 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	C15orf62	A8K5M9	175 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TMEM110-MUSTN1	A8MSY1	372 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SGK1	O00141	431 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CLDN4	O14493	209 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	MFSD11	O43934	449 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	PRKN	O60260	465 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CST8	O60676	142 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	RNASEH1	O60930	286 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF821	O75541	412 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	KLF8	O95600	359 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	POP4	O95707	220 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	IGSF6	O95976	241 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	PDGFB	P01127	241 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	EPO	P01588	193 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CD22	P20273	847 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	NR1D1	P20393	614 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CA4	P22748	312 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	PSMA3	P25788	255 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	STIP1	P31948	543 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	P2RY2	P41231	377 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	HNF4A	P41235	474 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SSR1	P43307	286 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	FNTA	P49354	379 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ASCL1	P50553	236 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ADAR	P55265	1226 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	RHOA	P61586	193 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SNRPD1	P62314	119 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	POLR2L	P62875	67 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	MAT1A	Q00266	395 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	GBE1	Q04446	702 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	KDSR	Q06136	332 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	RAD51	Q06609	339 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CYTH1	Q15438	398 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TTC31	Q49AM3	519 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ANKRD20A4	Q4UJ75	823 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CARD16	Q5EG05	197 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ANKRD20A2	Q5SQ80	823 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	GCNT6	Q5T4J0	391 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	C9orf64	Q5T6V5	341 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SEL1L2	Q5TEA6	688 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ANKRD20A1	Q5TYW2	823 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	MARC1	Q5VT66	337 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ANKRD20A3	Q5VUR7	823 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SHE	Q5VZ18	495 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF776	Q68DI1	518 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ADAM5	Q6NVV9	412 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ZNF449	Q6P9G9	518 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	C4orf22	Q6V702	233 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453		Q6ZS52	159 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ZBTB49	Q6ZSB9	765 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TMPRSS11F	Q6ZWK6	438 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	DET1	Q7L5Y6	550 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CCDC91	Q7Z6B0	441 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SLC13A5	Q86YT5	568 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	CDKL3	Q8IVW4	592 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ALLC	Q8N6M5	410 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TSTD1	Q8NFU3	115 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	RPLP0P6	Q8NHW5	317 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	DTX3L	Q8TDB6	740 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TFB1M	Q8WVM0	346 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	HTR3C	Q8WXA8	447 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	OR8D1	Q8WZ84	308 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	P3H4	Q92791	437 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SLCO2A1	Q92959	643 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	RAB7B	Q96AH8	199 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TADA1	Q96BN2	335 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	ECHDC3	Q96DC8	303 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	PPP1R16A	Q96I34	528 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	RUNDC3B	Q96NL0	473 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	MCCC1	Q96RQ3	725 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	LYSMD1	Q96S90	227 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SEPHS2	Q99611	448 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	NAPG	Q99747	312 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	BTBD10	Q9BSF8	475 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	KATNB1	Q9BVA0	655 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	POLR1E	Q9GZS1	481 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SEMA6A	Q9H2E6	1030 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	GOLPH3	Q9H4A6	298 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SGK2	Q9HBY8	427 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453		Q9N2K0	584 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	LZTFL1	Q9NQ48	299 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	PRSS16	Q9NQE7	514 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	COQ3	Q9NZJ6	369 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	LHX3	Q9UBR4	397 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	LEF1	Q9UJU2	399 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	DNPEP	Q9ULA0	475 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	SNX12	Q9UMY4	172 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	NDRG2	Q9UN36	371 aa	Known RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	TFR2	Q9UP52	801 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	GAB2	Q9UQC2	676 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	PPIL1	Q9Y3C6	166 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	GRIP1	Q9Y3R0	1128 aa		2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	MTF2	Q9Y483	593 aa	Predicted RBP	2.87	□□□□□ -1.95
MSI2-215	ENST00000582453	DOCK8	Q8NF50	2099 aa		2.86	□□□□□ -1.95

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