RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 SLA2Q9H6Q3 261 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 SEMA4GQ9NTN9 838 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 NTNG1Q9Y2I2 539 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 IRAK3Q9Y616 596 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 ALG5Q9Y673 324 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 A0A1W2PPV9 198 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 PRKCAP17252 672 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■■ 27.7
RNF43-205ENST00000581868 INPP1P49441 399 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 TAS2R38P59533 333 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 DUSP2Q05923 314 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 DPTQ07507 201 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 PIP5KL1Q5T9C9 394 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 B3GLCTQ6Y288 498 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 ZNF765Q7L2R6 523 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 LINC01555Q8NAE3 123 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 OR8K5Q8NH50 307 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 SUN3Q8TAQ9 357 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 KIAA1143Q96AT1 154 aaPredicted RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 GFM1Q96RP9 751 aaKnown RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 ATF6BQ99941 703 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 GIMAP4Q9NUV9 329 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 MRPS18AQ9NVS2 196 aaKnown RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 A0A0A6YYD5 115 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 IRGMA1A4Y4 181 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 LATO43561 262 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 CSF2RAP15509 400 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 CPN2P22792 545 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 RAB25P57735 213 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 GALK2Q01415 458 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 GRASPQ7Z6J2 395 aaPredicted RBP12.86□□□□□ -0.35
RNF43-205ENST00000581868 DTX3Q8N9I9 347 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 TMEM145Q8NBT3 493 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 NEIL3Q8TAT5 605 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 CXorf40AQ8TE69 158 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 FERD3LQ96RJ6 166 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 OSGEPL1Q9H4B0 414 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 PPP1R3EQ9H7J1 279 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 LOC102723532A0A0G2JNH3 316 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 TRDV1A0A1B0GX56 115 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 ANTXRLA6NF34 631 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 MAN2B1O00754 1011 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 PRKAR1AP10644 381 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 ERGP11308 486 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 ACP5P13686 325 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 HOXB3P14651 431 aaPredicted RBP12.86□□□□□ -0.35
RNF43-205ENST00000581868 ALAS2P22557 587 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
RNF43-205ENST00000581868 TRIM23P36406 574 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 GPR4P46093 362 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 CTBP2P56545 445 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 CHRNEQ04844 493 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 EFR3AQ14156 821 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 ARHGAP19Q14CB8 494 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 MLC1Q15049 377 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 DUSP6Q16828 381 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 WSCD2Q2TBF2 565 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 MZT2BQ6NZ67 158 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 LRRTM4Q86VH4 590 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
RNF43-205ENST00000581868 ART5Q96L15 291 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 BCL2L10Q9HD36 194 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 RBFOX1Q9NWB1 397 aaKnown RBP12.86□□□□□ -0.35
RNF43-205ENST00000581868 TAS2R7Q9NYW3 318 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 ATG4BQ9Y4P1 393 aa12.86□□□□□ -0.35
RNF43-205ENST00000581868 KIAA1549LQ6ZVL6 1849 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 LRIT2A6NDA9 550 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 NOTOA8MTQ0 251 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 SMLR1H3BR10 107 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 GABRPO00591 440 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 DVL2O14641 736 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 LYRM1O43325 122 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 ERI3O43414 337 aaKnown RBP12.85□□□□□ -0.35
RNF43-205ENST00000581868 HCN1O60741 890 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 SLC2A10O95528 541 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 RPN2P04844 631 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 SLC35G4P0C7Q5 338 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 DRD2P14416 443 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 TRHRP34981 398 aaPredicted RBP12.85□□□□□ -0.35
RNF43-205ENST00000581868 IFNGR2P38484 337 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 EVX1P49640 407 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
RNF43-205ENST00000581868 TSPAN31Q12999 210 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 SLC9A5Q14940 896 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 ZNF57Q68EA5 555 aaPredicted RBP12.85□□□□□ -0.35
RNF43-205ENST00000581868 NKAIN4Q8IVV8 208 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 OR4Q3Q8NH05 313 aa12.85□□□□□ -0.35
RNF43-205ENST00000581868 SPRYD4Q8WW59 207 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms