RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 SHISA7A6NL88 538 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 H0YGG7 62 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 FCMRO60667 390 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 IDUAP35475 653 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 ARF3P61204 181 aaPredicted RBP11.29□□□□□ -0.6
RTTN-207ENST00000581583 SIM1P81133 766 aaPredicted RBP11.29□□□□□ -0.6
RTTN-207ENST00000581583 EFNB1P98172 346 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 RHAGQ02094 409 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 TRAM2Q15035 370 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 ARHGAP11BQ3KRB8 267 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 TIMM50Q3ZCQ8 353 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 KIAA0895LQ68EN5 471 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 FAM111BQ6SJ93 734 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 RNF44Q7L0R7 432 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 HMGN2P46Q86SG4 172 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 IGFN1Q86VF2 1251 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 VRK2Q86Y07 508 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 TOR1AIP2Q8NFQ8 470 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 DIO2Q92813 273 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 MGLLQ99685 303 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 ALOXE3Q9BYJ1 711 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 RACGAP1Q9H0H5 632 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 MMP27Q9H306 513 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 ZNF576Q9H609 170 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
RTTN-207ENST00000581583 ZNF232Q9UNY5 417 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 CHST2Q9Y4C5 530 aa11.29□□□□□ -0.6
RTTN-207ENST00000581583 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 A0A087WV62 115 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 A0A0J9YY10 115 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 SULT1C4O75897 302 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 ATP1B1P05026 303 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 IFI6P09912 130 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
RTTN-207ENST00000581583 NUDT1P36639 197 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 PCYT1AP49585 367 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 SMSP52788 366 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 PDX1P52945 283 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 RBM12BQ8IXT5 1001 aaKnown RBP11.28□□□□□ -0.6
RTTN-207ENST00000581583 AMER2Q8N7J2 671 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 GNPDA2Q8TDQ7 276 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 TMEM80Q96HE8 168 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 CACYBPQ9HB71 228 aaKnown RBP11.28□□□□□ -0.6
RTTN-207ENST00000581583 GPR27Q9NS67 375 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 FAIMQ9NVQ4 179 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 C19orf53Q9UNZ5 99 aaPredicted RBP11.28□□□□□ -0.6
RTTN-207ENST00000581583 PCDHGA3Q9Y5H0 932 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 CBFA2T3O75081 653 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 LSSP48449 732 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
RTTN-207ENST00000581583 ITGADQ13349 1161 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 GINS1Q14691 196 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 MED22Q15528 200 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 RGS21Q2M5E4 152 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 ZNF628Q5EBL2 1059 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 FRRS1Q6ZNA5 592 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 DCDC5Q6ZRR9 648 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 RRM2BQ7LG56 351 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 PEX5LQ8IYB4 626 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 KBTBD8Q8NFY9 601 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 SLC37A2Q8TED4 501 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 PATE1Q8WXA2 126 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 SLC9A6Q92581 669 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 TOE1Q96GM8 510 aaKnown RBP11.28□□□□□ -0.6
RTTN-207ENST00000581583 COX4I2Q96KJ9 171 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 GPA33Q99795 319 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 PIGUQ9H490 435 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 IL21RQ9HBE5 538 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 ZBTB20Q9HC78 741 aaPredicted RBP11.28□□□□□ -0.6
RTTN-207ENST00000581583 TVP23BQ9NYZ1 205 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 WDR45Q9Y484 360 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 NINQ8N4C6 2090 aa11.28□□□□□ -0.6
RTTN-207ENST00000581583 SPTBN5Q9NRC6 3674 aaKnown RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 CCRL2O00421 344 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 CYR61O00622 381 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 AP3D1O14617 1153 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 TLX2O43763 284 aaPredicted RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 PLOD3O60568 738 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 DNAJB6O75190 326 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 HSMCR30P0CW71 290 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 DBTP11182 482 aaKnown RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 TSPAN31Q12999 210 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 DUSP8Q13202 625 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 LARS2Q15031 903 aaKnown RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 ZCCHC12Q6PEW1 402 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 TAF8Q7Z7C8 310 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 OR4N5Q8IXE1 308 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 MFSD4AQ8N468 514 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 WDR36Q8NI36 951 aaKnown RBP11.27□□□□□ -0.6
RTTN-207ENST00000581583 CDS1Q92903 461 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 OR5M11Q96RB7 305 aa11.27□□□□□ -0.6
RTTN-207ENST00000581583 KLHL25Q9H0H3 589 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms