RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KALRNO60229 2985 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 C2orf92A0A1B0GVN3 265 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 UPK1AO00322 258 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 DPM1O60762 260 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 ITGA10O75578 1167 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 SOX30O94993 753 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 CPSF4O95639 269 aaKnown RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 C6orf47O95873 294 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 PDGFAP04085 211 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 EFNA1P20827 205 aaPredicted RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 CASRP41180 1078 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 CORO7P57737 925 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 DCAF7P61962 342 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 ARG2P78540 354 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 PRR5P85299 388 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 DUSP8Q13202 625 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 LY6DQ14210 128 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 SERPINA11Q86U17 422 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 ULK2Q8IYT8 1036 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 CLECL1Q8IZS7 167 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 BEST3Q8N1M1 668 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 SLC22A8Q8TCC7 542 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 ZFP90Q8TF47 636 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 POP5Q969H6 163 aaKnown RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 TMEM125Q96AQ2 219 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 CPPED1Q9BRF8 314 aaPredicted RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 IL1RL2Q9HB29 575 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 C3orf14Q9HBI5 128 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 ZNF71Q9NQZ8 489 aaPredicted RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 THUMPD1Q9NXG2 353 aaKnown RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 SLC25A37Q9NYZ2 338 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 ADA2Q9NZK5 511 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 NTMQ9P121 344 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 CD300AQ9UGN4 299 aa14.36□□□□□ -0.11
SS18-216ENST00000580751 HEMK1Q9Y5R4 338 aaPredicted RBP14.36□□□□□ -0.11
SS18-216ENST00000580751 TMEM200CA6NKL6 621 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 CLIC1O00299 241 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 WWP2O00308 870 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 MAN1A2O60476 641 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 OR2J2O76002 312 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 PSMG1O95456 288 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 GPX2P18283 190 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 ME2P23368 584 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
SS18-216ENST00000580751 EMDP50402 254 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SSR4P51571 173 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SLC7A2P52569 658 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 PSPHP78330 225 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 ZNF155Q12901 538 aaPredicted RBP14.35□□□□□ -0.11
SS18-216ENST00000580751 BNIP2Q12982 314 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 FADDQ13158 208 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 FXNQ16595 210 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SPDYE7PQ495Y7 208 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SZRD1Q7Z422 152 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 MSRB3Q8IXL7 192 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 C10orf67Q8IYJ2 551 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 TAGAPQ8N103 731 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 TMEM156Q8N614 296 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SLC15A4Q8N697 577 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 ZNF441Q8N8Z8 693 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SIMC1Q8NDZ2 872 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 OR56A1Q8NGH5 318 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 HAS2Q92819 552 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 TP53INP1Q96A56 240 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 MAGED4Q96JG8 741 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 MS4A4EQ96PG1 132 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 UTP23Q9BRU9 249 aaKnown RBP14.35□□□□□ -0.11
SS18-216ENST00000580751 KAT8Q9H7Z6 458 aaKnown RBP14.35□□□□□ -0.11
SS18-216ENST00000580751 ANKRA2Q9H9E1 313 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 TPT1P8Q9HAU6 139 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 ZBTB20Q9HC78 741 aaPredicted RBP14.35□□□□□ -0.11
SS18-216ENST00000580751 SUCOQ9UBS9 1254 aaKnown RBP14.35□□□□□ -0.11
SS18-216ENST00000580751 ERVK-11Q9UQG0 969 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 SNX8Q9Y5X2 465 aa14.35□□□□□ -0.11
SS18-216ENST00000580751 OR5H15A6NDH6 313 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 K7EM74 188 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 ACOX3O15254 700 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 EMC8O43402 210 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 CIB2O75838 187 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 WDPCPO95876 746 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 SOAT1P35610 550 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 CDKN2CP42773 168 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 ANXA11P50995 505 aaKnown RBP14.34□□□□□ -0.11
SS18-216ENST00000580751 NRG3P56975 720 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 KCNJ2P63252 427 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 TRAP1Q12931 704 aaKnown RBP14.34□□□□□ -0.11
SS18-216ENST00000580751 CAPRIN1Q14444 709 aaKnown RBP14.34□□□□□ -0.11
SS18-216ENST00000580751 GPALPP1Q8IXQ4 340 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 HORMAD2Q8N7B1 307 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 OR52N2Q8NGI0 321 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 ASB15Q8WXK1 588 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 ADIPOR1Q96A54 375 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 NEURL3Q96EH8 262 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 FAM120BQ96EK7 910 aaKnown RBP14.34□□□□□ -0.11
SS18-216ENST00000580751 VSTM2LQ96N03 204 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 BTBD9Q96Q07 612 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 RASL10BQ96S79 203 aa14.34□□□□□ -0.11
SS18-216ENST00000580751 ECSITQ9BQ95 431 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms