RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 LINC01387J3KSC0 135 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 TSPAN2O60636 221 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 COQ9O75208 318 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 UGT2B11O75310 529 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 TRAPPC6AO75865 159 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 IL3P08700 152 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 PCSK2P16519 638 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 SRD5A2P31213 254 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 CRHR1P34998 444 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 CCT5P48643 541 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 TRPC1P48995 793 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 GFRA1P56159 465 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 HMGCS1Q01581 520 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 OCRLQ01968 901 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 DUSP2Q05923 314 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 ZNF763Q0D2J5 394 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 RCAN2Q14206 197 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 EXOSC7Q15024 291 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 CYP27C1Q4G0S4 372 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 TEX35Q5T0J7 233 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 BICRALQ6AI39 1079 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 ZYG11AQ6WRX3 759 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 RPS27LQ71UM5 84 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 PLCZ1Q86YW0 608 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 WDSUB1Q8N9V3 476 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 RELL2Q8NC24 303 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 FAM83FQ8NEG4 500 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 C16orf78Q8WTQ4 265 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 TM9SF2Q99805 663 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 CXXC4Q9H2H0 198 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 MYNNQ9NPC7 610 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 ABCG2Q9UNQ0 655 aa13.21□□□□□ -0.29
SMARCE1-216ENST00000580419 G3V2L1 256 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 ERN1O75460 977 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 RSL1D1O76021 490 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 ZWINTO95229 277 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 PSMG1O95456 288 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 CRHP06850 196 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 PYGBP11216 843 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 TSPAN8P19075 237 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 CTSSP25774 331 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 KIR2DL3P43628 341 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 ALDH9A1P49189 494 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 NAGLUP54802 743 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 MYBPHQ13203 477 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 FLYWCH1Q4VC44 716 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 AAGABQ6PD74 315 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 ANGPTL8Q6UXH0 198 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 FRMD7Q6ZUT3 714 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 CCDC116Q8IYX3 515 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 FAM9CQ8IZT9 166 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 MMP21Q8N119 569 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 ADCY4Q8NFM4 1077 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 TNIP2Q8NFZ5 429 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 WNT2BQ93097 391 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 APIPQ96GX9 242 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 NODALQ96S42 347 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 TRMOQ9BU70 441 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 SFXN3Q9BWM7 321 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 KLRF1Q9NZS2 232 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 WIF1Q9Y5W5 379 aa13.2□□□□□ -0.3
SMARCE1-216ENST00000580419 TBX19O60806 448 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 RCBTB2O95199 551 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 ANXA4P09525 319 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 MYL2P10916 166 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 CYP4B1P13584 511 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 CHN1P15882 459 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 KRT20P35900 424 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 ZNF136P52737 540 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 MRPS35P82673 323 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 GAB1Q13480 694 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 GANABQ14697 944 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 LTB4RQ15722 352 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 EIPR1Q53HC9 387 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 TCHHL1Q5QJ38 904 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 FAM71E1Q6IPT2 247 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 PRR22Q8IZ63 422 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 NAXEQ8NCW5 288 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 GOT1L1Q8NHS2 421 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 HOXB13Q92826 284 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 TMBIM1Q969X1 311 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 HBEGFQ99075 208 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 FOXC2Q99958 501 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 RASSF1Q9NS23 344 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 OXSMQ9NWU1 459 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 EMCNQ9ULC0 261 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 C19orf53Q9UNZ5 99 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 ACANP16112 2415 aa13.19□□□□□ -0.3
SMARCE1-216ENST00000580419 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.3
SMARCE1-216ENST00000580419 ZNF469Q96JG9 3925 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-216ENST00000580419 UBFD1O14562 309 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-216ENST00000580419 HCRTR2O43614 444 aa13.18□□□□□ -0.3
SMARCE1-216ENST00000580419 LRATO95237 230 aa13.18□□□□□ -0.3
SMARCE1-216ENST00000580419 PROCP04070 461 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms