RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MIPOL1Q8TD10 442 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 HOXB13Q92826 284 aaPredicted RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 TSLPQ969D9 159 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 PPWD1Q96BP3 646 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 NXPE2Q96DL1 559 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 FAM120BQ96EK7 910 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 FBXL20Q96IG2 436 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 ART5Q96L15 291 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CPPED1Q9BRF8 314 aaPredicted RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 EFHD1Q9BUP0 239 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 IL1RL2Q9HB29 575 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GP6Q9HCN6 339 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 SPAG4Q9NPE6 437 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GPATCH2Q9NW75 528 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GIN1Q9NXP7 522 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CD300AQ9UGN4 299 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CORO2BQ9UQ03 480 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 PTRH2Q9Y3E5 179 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 SNX8Q9Y5X2 465 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CLCA3PQ9Y6N3 262 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 SPTBN2O15020 2390 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 FRYQ5TBA9 3013 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CELSR3Q9NYQ7 3312 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CACNA1AO00555 2505 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 RNF103-CHMP3A0A140T963 221 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 LOC101059948A0A1B0GTJ6 334 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 TTC36A6NLP5 189 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 DNAJC8O75937 253 aaPredicted RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 ALX3O95076 343 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CBX7O95931 251 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 IFNA16P05015 189 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 TNNI3P19429 210 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 EFNA1P20827 205 aaPredicted RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 F8A1P23610 371 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 MAP3K8P41279 467 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 FOLR3P41439 243 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 MC3RP41968 323 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 EEFSECP57772 596 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 OR4D2P58180 307 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 FADDQ13158 208 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GAB1Q13480 694 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CAPRIN1Q14444 709 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 RGNQ15493 299 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 LTB4RQ15722 352 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GTDC1Q4AE62 458 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 TRMT12Q53H54 448 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 SAMD4BQ5PRF9 694 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 PGM2L1Q6PCE3 622 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 FAM111BQ6SJ93 734 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 TMEM107Q6UX40 140 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CPEB2Q7Z5Q1 589 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 SERPINA11Q86U17 422 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CALHM3Q86XJ0 350 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 PRSS58Q8IYP2 241 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 ZNF615Q8N8J6 731 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 NFAM1Q8NET5 270 aaPredicted RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 OR7G2Q8NG99 324 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 OR1N1Q8NGS0 311 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 KAT2AQ92830 837 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 TMEM125Q96AQ2 219 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 RNF31Q96EP0 1072 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 GIMAP5Q96F15 307 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 VPS50Q96JG6 964 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CDRT15Q96T59 188 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 WDR77Q9BQA1 342 aaPredicted RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 SLC39A3Q9BRY0 314 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 SLC35A5Q9BS91 424 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 THUMPD3Q9BV44 507 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 SCNM1Q9BWG6 230 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 ASPNQ9BXN1 380 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CADM1Q9BY67 442 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 SEMA4CQ9C0C4 833 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 ZNF700Q9H0M5 742 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 RAD21L1Q9H4I0 556 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 ZCCHC3Q9NUD5 404 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 DDX18Q9NVP1 670 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 CMTM6Q9NX76 183 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 THUMPD1Q9NXG2 353 aaKnown RBP7.45□□□□□ -1.22
COPS3-215ENST00000578317 DKK4Q9UBT3 224 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 KLK13Q9UKR3 277 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 CFL2Q9Y281 166 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 EMC9Q9Y3B6 208 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 L3MBTL1Q9Y468 752 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 HS3ST3B1Q9Y662 390 aa7.45□□□□□ -1.22
COPS3-215ENST00000578317 AKAP13Q12802 2813 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 ADAMTS20P59510 1910 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 SAGE2PA6NJ88 616 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 DUXAA6NLW8 204 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 OR6C76A6NM76 312 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 C17orf105B2RV13 164 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 TBX1O43435 398 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 ASNA1O43681 348 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 COQ9O75208 318 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 DDAH2O95865 285 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 AGR2O95994 175 aa7.44□□□□□ -1.22
COPS3-215ENST00000578317 HMGN2P05204 90 aaKnown RBP7.44□□□□□ -1.22
COPS3-215ENST00000578317 CT62P0C5K7 136 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms