RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 HIPK1Q86Z02 1210 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 KBTBD2Q8IY47 623 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 SFXN5Q8TD22 340 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 FAR1Q8WVX9 515 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 RASSF5Q8WWW0 418 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
SREBF1-217ENST00000577897 ZNF501Q96CX3 271 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-217ENST00000577897 ZNF597Q96LX8 424 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 FER1L6-AS2Q96M78 137 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 RDH12Q96NR8 316 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 CIB1Q99828 191 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 WDR77Q9BQA1 342 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-217ENST00000577897 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-217ENST00000577897 SLC35C2Q9NQQ7 365 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 SLC6A13Q9NSD5 602 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 SEMA5BQ9P283 1151 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 UTS2RQ9UKP6 389 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 EXO1Q9UQ84 846 aaKnown RBP13.09□□□□□ -0.31
SREBF1-217ENST00000577897 HEATR5BQ9P2D3 2071 aa13.09□□□□□ -0.31
SREBF1-217ENST00000577897 FER1L5A0AVI2 2057 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 E2F6O75461 281 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 HPRP00739 348 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 ZNF26P17031 533 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 ITGA2P17301 1181 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 CSNK2A2P19784 350 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 MAGP20916 626 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 PPP2R1BP30154 601 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 FRKP42685 505 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 YBX1P67809 324 aaKnown RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 BTN3A2P78410 334 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 PRR5P85299 388 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 TP53BP2Q13625 1128 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 NCF4Q15080 339 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 NDUFA9Q16795 377 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 RFX4Q33E94 735 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 DCAF10Q5QP82 559 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 CBLL1Q75N03 491 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 UBE3DQ7Z6J8 389 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 MRGPRGQ86SM5 289 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 KMT5CQ86Y97 462 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 ST13P4Q8IZP2 240 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 D2HGDHQ8N465 521 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 MARVELD2Q8N4S9 558 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 NANOS1Q8WY41 292 aaKnown RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 CIDECQ96AQ7 238 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 NEURL3Q96EH8 262 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 LRFN5Q96NI6 719 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 DPH2Q9BQC3 489 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 SORBS1Q9BX66 1292 aaKnown RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 SLC7A5P2Q9GIP4 190 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 C3orf14Q9HBI5 128 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 IFT80Q9P2H3 777 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-217ENST00000577897 AP4B1Q9Y6B7 739 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 V9GYQ6 96 aa13.08□□□□□ -0.32
SREBF1-217ENST00000577897 A0A0J9YVX5 310 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 C9J4A7 227 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 G3V2T6 193 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 PEX12O00623 359 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TMPRSS11DO60235 418 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TBX6O95947 436 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 FABP3P05413 133 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 NR2F6P10588 404 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 CDH3P22223 829 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 SSTR2P30874 369 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 RORAP35398 523 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 DSTNP60981 165 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 SCARB2Q14108 478 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 GK3PQ14409 553 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 PDK3Q15120 406 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■□□□ 11.4
SREBF1-217ENST00000577897 MRM1Q6IN84 353 aaKnown RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 KRT80Q6KB66 452 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 FBXO42Q6P3S6 717 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 FAM180AQ6UWF9 173 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TMEM64Q6YI46 380 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 CLEC4FQ8N1N0 589 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 CBR4Q8N4T8 237 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 OR56A1Q8NGH5 318 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 OR8K5Q8NH50 307 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 PSMA8Q8TAA3 256 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 PNPT1Q8TCS8 783 aaKnown RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TM4SF19Q96DZ7 209 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 ZNF347Q96SE7 839 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 RBM4BQ9BQ04 359 aaKnown RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 SPATA5L1Q9BVQ7 753 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 RBM4Q9BWF3 364 aaKnown RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 NPLQ9BXD5 320 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 TRIM45Q9H8W5 580 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-217ENST00000577897 FANCEQ9HB96 536 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 LYRM4Q9HD34 91 aa13.07□□□□□ -0.32
SREBF1-217ENST00000577897 FBXW2Q9UKT8 454 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms