RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ADIPOR1Q96A54 375 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 VMP1Q96GC9 406 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 VSTM2LQ96N03 204 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CPPED1Q9BRF8 314 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MESP1Q9BRJ9 268 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC35A5Q9BS91 424 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LMF2Q9BU23 707 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RAD21L1Q9H4I0 556 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 KAT8Q9H7Z6 458 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 THUMPD1Q9NXG2 353 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 P4HTMQ9NXG6 502 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TMEM181Q9P2C4 612 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRODH2Q9UF12 536 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MRPS18BQ9Y676 258 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SVILO95425 2214 aa10.33□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MYOCOSA0A1B0GUC4 107 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DUXAA6NLW8 204 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF891A8MT65 544 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HRKO00198 91 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TO15178 435 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RRP9O43818 475 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DNAJA2O60884 412 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HMGN2P05204 90 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 GSNP06396 782 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EFNA1P20827 205 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DRD5P21918 477 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SSTR4P31391 388 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PPICP45877 212 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NUDT2P50583 147 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CLCN2P51788 898 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ESPL1Q14674 2120 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RGNQ15493 299 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FXNQ16595 210 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C6orf163Q5TEZ5 329 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FAAH2Q6GMR7 532 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MFSD12Q6NUT3 480 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 JMJD6Q6NYC1 403 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CDC73Q6P1J9 531 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C16orf89Q6UX73 402 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ASRGL1Q7L266 308 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NET1Q7Z628 596 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MRGPREQ86SM8 312 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CALHM3Q86XJ0 350 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LGI4Q8N135 537 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF441Q8N8Z8 693 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TMEM102Q8N9M5 508 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CDRT4Q8N9R6 151 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RBM15BQ8NDT2 890 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SIMC1Q8NDZ2 872 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR52R1Q8NGF1 315 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C16orf52Q8NHV5 167 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FBXO27Q8NI29 283 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C9orf43Q8TAL5 461 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TMEM125Q96AQ2 219 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C8orf44Q96CB5 159 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FER1L6-AS2Q96M78 137 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MS4A4EQ96PG1 132 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 BTBD9Q96Q07 612 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 STACQ99469 402 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 BTBD10Q9BSF8 475 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NUDT9Q9BW91 350 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SPATA9Q9BWV2 254 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ACTRT3Q9BYD9 372 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MMADHCQ9H3L0 296 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PIGUQ9H490 435 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DUSP22Q9NRW4 184 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZCCHC3Q9NUD5 404 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DDX18Q9NVP1 670 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF223Q9UK11 482 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ERVK-19Q9WJR5 959 aa10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 GPR55Q9Y2T6 319 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NSG1A0A0A6YYJ2 146 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 IGHV3-20A0A0C4DH32 117 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RNF103-CHMP3A0A140T963 221 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TMEM200CA6NKL6 621 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EVPLLA8MZ36 301 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PEX12O00623 359 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TNFRSF21O75509 655 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NKX2-2O95096 273 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 AGR2O95994 175 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SERPINA7P05543 415 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CT45A8P0DMV1 189 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CT45A9P0DMV2 189 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 GNLYP22749 145 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRIM2P49643 509 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PSME3P61289 254 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RNF4P78317 190 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PSG6Q00889 435 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 KLRB1Q12918 225 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 GTDC1Q4AE62 458 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CT45A2Q5DJT8 189 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DCAF10Q5QP82 559 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HEPHL1Q6MZM0 1159 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RNF111Q6ZNA4 994 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RINLQ6ZS11 566 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 METTL25Q8N6Q8 603 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF321PQ8N8H1 164 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms