RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MTFR2Q6P444 385 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 MEX3DQ86XN8 651 aaKnown RBP12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 FOXRED2Q8IWF2 684 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 HDDC3Q8N4P3 179 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 SAMD8Q96LT4 415 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 C5orf34Q96MH7 638 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 NDUFAF4Q9P032 175 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3DA0A087WVF3 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3EA0A087X179 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3KA0A087X1G2 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TRBV4-1A0A0J9YWV2 114 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3FA6NER0 549 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 NAP1L6A6NFF2 107 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3LB9A6J9 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 CACNG3O60359 315 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3HP0C7X1 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 GJA1P17302 382 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 IL1RNP18510 177 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ART1P52961 327 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3GQ6DHY5 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3CQ6IPX1 549 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR5W2Q8NH69 310 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 NSMAFQ92636 917 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZIC5Q96T25 663 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 METTL17Q9H7H0 456 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 PLSCR3Q9NRY6 295 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SOHLH2Q9NX45 425 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC25A37Q9NYZ2 338 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 CLEC2DQ9UHP7 191 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMPRSS11EQ9UL52 423 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF705EA8MWA4 302 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 EMC8O43402 210 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SC5DO75845 299 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ELNP15502 786 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 CCR7P32248 378 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 OTUD1Q5VV17 481 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 HACD4Q5VWC8 232 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF461Q8TAF7 563 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF350Q9GZX5 532 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 IKZF5Q9H5V7 419 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ACSL5Q9ULC5 683 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SNX11Q9Y5W9 270 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 A0A0G2JMP0 313 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ARAFP10398 606 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 PTPN2P17706 415 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 HOXC13P31276 330 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ERVK-25P63136 954 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 FGL1Q08830 312 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SPRYD7Q5W111 196 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 MFSD4AQ8N468 514 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 FBXO15Q8NCQ5 510 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 GPR26Q8NDV2 337 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR2L3Q8NG85 312 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR4M2Q8NGB6 313 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SETD7Q8WTS6 366 aaKnown RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 C7orf34Q96L11 122 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 DDX31Q9H8H2 851 aaKnown RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 CLDN4O14493 209 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 AXIN1O15169 862 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 GPX5O75715 221 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 CYB5AP00167 134 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 MT-ND4P03905 459 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 LAG3P18627 525 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 AOAHP28039 575 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 AFF1P51825 1210 aaKnown RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ACTA2P62736 377 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ACTG2P63267 376 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 POU4F2Q12837 409 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ILKQ13418 452 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 ARFRP1Q13795 201 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 LRIF1Q5T3J3 769 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 IL20RBQ6UXL0 311 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 APCDD1Q8J025 514 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMEM163Q8TC26 289 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 SORCS1Q8WY21 1168 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 MFFQ9GZY8 342 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 GABARAPL1Q9H0R8 117 aa12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 AK6Q9Y3D8 172 aaKnown RBP12.43□□□□□ -0.42
PCDHGB3-201ENST00000576222 MBLAC1A4D2B0 266 aaPredicted RBP12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 C8AP07357 584 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 DDCP20711 480 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 PTPN6P29350 595 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 WASP42768 502 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 HES5Q5TA89 166 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR4F15Q8NGB8 312 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF689Q96CS4 500 aaPredicted RBP12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC39A13Q96H72 371 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 ERVK-19Q9WJR5 959 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 SLC19A1P41440 591 aa12.42□□□□□ -0.42
PCDHGB3-201ENST00000576222 PTH2RP49190 550 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms