RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 GMPPAQ96IJ6 420 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 SLC39A3Q9BRY0 314 aa6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 FEM1AQ9BSK4 669 aa6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 TMEM43Q9BTV4 400 aa6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 GPN2Q9H9Y4 310 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 KCNG2Q9UJ96 466 aa6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 CRLS1Q9UJA2 301 aa6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 NIP7Q9Y221 180 aaKnown RBP eCLIP6.91□□□□□ -1.3
CALCOCO2-226ENST00000575461 IGHV3-20A0A0C4DH32 117 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 FAM240BA0A1B0GVZ2 78 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 LCMT2O60294 686 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 RANBP6O60518 1105 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 LMX1BO60663 402 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 TPST2O60704 377 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 OAS1P00973 400 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 DBTP11182 482 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 ANXA3P12429 323 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 OPRL1P41146 370 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 PLA2G16P53816 162 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 SNRPD1P62314 119 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 RPL23AP62750 156 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 KIAA0141Q14154 515 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 SYPL1Q16563 259 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 KNOP1Q1ED39 458 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 CYBRD1Q53TN4 286 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 STPG1Q5TH74 334 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 AGAP7PQ5VUJ5 663 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 TPGS2Q68CL5 300 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 Q6ZPB1 254 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 Q6ZSR9 355 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 NANOGNBQ7Z5D8 188 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 SPEM1Q8N4L4 309 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 OR8J1Q8NGP2 316 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 NANPQ8TBE9 248 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 TMEM190Q8WZ59 177 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 ART4Q93070 314 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 OR4F4Q96R69 305 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 TNFRSF13CQ96RJ3 184 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 GON7Q9BXV9 100 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 PKIBQ9C010 78 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 NT5DC2Q9H857 520 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 RPH3ALQ9UNE2 315 aa6.9□□□□□ -1.3
CALCOCO2-226ENST00000575461 NSD2O96028 1365 aa6.9□□□□□ -1.31
CALCOCO2-226ENST00000575461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 FAM47DPA6NHR8 397 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 RNF212BA8MTL3 300 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 TRAFD1O14545 582 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 NXPH4O95158 308 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 AOC1P19801 751 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 CALML3P27482 149 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 PDHA2P29803 388 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 CCKARP32238 428 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 SAA4P35542 130 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 MMP12P39900 470 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 GRIA1P42261 906 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 ZNF177Q13360 481 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 MAPK6Q16659 721 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 UPP1Q16831 310 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 CFAP221Q4G0U5 840 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 LCLAT1Q6UWP7 414 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 BTNL3Q6UXE8 466 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 LRRC75A-AS1Q8N1F1 130 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 OR52J3Q8NH60 311 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 C11orf52Q96A22 123 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 COQ2Q96H96 371 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 DGCR6LQ9BY27 220 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 COMMD4Q9H0A8 199 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 SLC25A51Q9H1U9 297 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 IL1RAPQ9NPH3 570 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 AIPL1Q9NZN9 384 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 PIPOXQ9P0Z9 390 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 SEC14L4Q9UDX3 406 aa6.89□□□□□ -1.31
CALCOCO2-226ENST00000575461 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 METTL21EPA6NDL7 271 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 KLHL41O60662 606 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 PDE5AO76074 875 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 FOSL2P15408 326 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 CD1DP15813 335 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 EMDP50402 254 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 MAP2K1Q02750 393 aaPredicted RBP6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 EIF2B1Q14232 305 aaKnown RBP6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 TSEN54Q7Z6J9 526 aaKnown RBP6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 TMEM17Q86X19 198 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 NBPF5PQ86XG9 351 aaPredicted RBP6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 RCHY1Q96PM5 261 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 NPAS2Q99743 824 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 NFKBIZQ9BYH8 718 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 WDR41Q9HAD4 459 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 THYN1Q9P016 225 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 GALPQ9UBC7 116 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 ICAM5Q9UMF0 924 aa6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 EXOSC1Q9Y3B2 195 aaKnown RBP6.88□□□□□ -1.31
CALCOCO2-226ENST00000575461 A0A1W2PNV4 684 aa6.87□□□□□ -1.31
CALCOCO2-226ENST00000575461 ESYT2A0FGR8 921 aa6.87□□□□□ -1.31
CALCOCO2-226ENST00000575461 BCLAF3A2AJT9 711 aaKnown RBP6.87□□□□□ -1.31
CALCOCO2-226ENST00000575461 CASKO14936 926 aa6.87□□□□□ -1.31
CALCOCO2-226ENST00000575461 ECI2O75521 394 aa6.87□□□□□ -1.31
CALCOCO2-226ENST00000575461 CIB2O75838 187 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms