RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 WASH6PQ9NQA3 447 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 A4GNTQ9UNA3 340 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 BAIAP2Q9UQB8 552 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ALDOBP05062 364 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 KLK1P06870 262 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ANKRD34CP0C6C1 535 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 SHC1P29353 583 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 BLVRAP53004 296 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 AP1S2P56377 157 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ERVK-21P61565 698 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 DUSP4Q13115 394 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 LRRC73Q5JTD7 316 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 GDF6Q6KF10 455 aaPredicted RBP13.58□□□□□ -0.24
SMG6-215ENST00000574501 AGTRAPQ6RW13 159 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 OAFQ86UD1 273 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 MOSPD2Q8NHP6 518 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 C16orf78Q8WTQ4 265 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 PTP4A1Q93096 173 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ASIC4Q96FT7 647 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ZFP3Q96NJ6 502 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 FUZQ9BT04 418 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 SLC6A16Q9GZN6 736 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 BRD9Q9H8M2 597 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 MRPS18AQ9NVS2 196 aaKnown RBP13.58□□□□□ -0.24
SMG6-215ENST00000574501 CPNE7Q9UBL6 633 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ATPIF1Q9UII2 106 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ARHGEF33A8MVX0 844 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 SOX30O94993 753 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 HSD3B2P26439 372 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 MMP12P39900 470 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 RFX3P48380 749 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 KIAA1024LP59773 190 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 MLLT1Q03111 559 aaPredicted RBP13.57□□□□□ -0.24
SMG6-215ENST00000574501 TLE2Q04725 743 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 GRIN2CQ14957 1233 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 MINDY4Q4G0A6 757 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 C3P1Q6ZMU1 363 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 TMPRSS11BQ86T26 416 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 ADAMTS14Q8WXS8 1223 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 ACOT12Q8WYK0 555 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 PDXPQ96GD0 296 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 SAV1Q9H4B6 383 aaPredicted RBP13.57□□□□□ -0.24
SMG6-215ENST00000574501 ISG20L2Q9H9L3 353 aaKnown RBP13.57□□□□□ -0.24
SMG6-215ENST00000574501 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
SMG6-215ENST00000574501 TMEM202A6NGA9 273 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 ANHXE9PGG2 379 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 BNIP3LO60238 219 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 NTN1O95631 604 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 PLATP00750 562 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 LPLP06858 475 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 RBMS1P29558 406 aaKnown RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 HLA-FP30511 346 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 VIPR1P32241 457 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 CDH11P55287 796 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 ERVFC1P60507 584 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 DGCR2P98153 550 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 MEF2AQ02078 507 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 ZNF33BQ06732 778 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 TCTE1Q5JU00 501 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 SFRP5Q5T4F7 317 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 HBMQ6B0K9 141 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 CRTC1Q6UUV9 634 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 ATRAIDQ6UW56 229 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 C17orf107Q6ZR85 190 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 FBXO15Q8NCQ5 510 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 NEIL2Q969S2 332 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 CXorf40BQ96DE9 158 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 ZNF354BQ96LW1 612 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 FNDC11Q9BVV2 318 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 SARGQ9BW04 601 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 SYNDIG1Q9H7V2 258 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 GPBP1L1Q9HC44 474 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 SEC14L3Q9UDX4 400 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 FLVCR2Q9UPI3 526 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 ZNF593O00488 134 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 SIGLEC5O15389 551 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 TBL1XO60907 577 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 KLHL18O94889 574 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 DRD2P14416 443 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 GJA1P17302 382 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 CXCL2P19875 107 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 CCND3P30281 292 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 ATP6V1E1P36543 226 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 RPS7P62081 194 aaKnown RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 EIF2B5Q13144 721 aaKnown RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 RGS7BPQ6MZT1 257 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 TRPV1Q8NER1 839 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 WFDC5Q8TCV5 224 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 ELMOD3Q96FG2 381 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 RADILQ96JH8 1075 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 SLC38A2Q96QD8 506 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 AP5M1Q9H0R1 490 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 LDAHQ9H6V9 325 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 STOX2Q9P2F5 926 aaPredicted RBP13.56□□□□□ -0.24
SMG6-215ENST00000574501 ACSL5Q9ULC5 683 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms