RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MARVELD2Q8N4S9 558 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 C1orf52Q8N6N3 182 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 CDYL2Q8N8U2 506 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 CEP70Q8NHQ1 597 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 PAQR8Q8TEZ7 354 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 CHTF18Q8WVB6 975 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 DIO2Q92813 273 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 SARAFQ96BY9 339 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 ZNF597Q96LX8 424 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 FAIM2Q9BWQ8 316 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 NUF2Q9BZD4 464 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 OR10A5Q9H207 317 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 ZNF703Q9H7S9 590 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 CXorf21Q9HAI6 301 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 BRF2Q9HAW0 419 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 NOP53Q9NZM5 478 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 CNIH4Q9P003 139 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 BCAP29Q9UHQ4 241 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 RNF6Q9Y252 685 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 CSMD1Q96PZ7 3565 aa8.89□□□□□ -0.99
NPLOC4-216ENST00000574344 NKX2-6A6NCS4 301 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 PPP6CO00743 305 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 AQP7O14520 342 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 SUSD5O60279 629 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 SKAP2O75563 359 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 IGHG3P01860 377 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 CLPSP04118 112 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 ACVR2AP27037 513 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 FEN1P39748 380 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 KIR3DL1P43629 444 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TRPC1P48995 793 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 NUP107P57740 925 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 FBXW4P57775 412 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 RPP38P78345 283 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 FOXO1Q12778 655 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 KLF10Q13118 480 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TOMM20Q15388 145 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 NTRK2Q16620 822 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 GXYLT1Q4G148 440 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 EMC4Q5J8M3 183 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TCHHL1Q5QJ38 904 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TBCELQ5QJ74 424 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 FAM219BQ5XKK7 198 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TMEM198Q66K66 360 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 SLC48A1Q6P1K1 146 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 B3GNT6Q6ZMB0 384 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 RINLQ6ZS11 566 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 GPRIN3Q6ZVF9 776 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 CCDC71Q8IV32 467 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 PRR22Q8IZ63 422 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 VWA5B2Q8N398 1253 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TMEM151AQ8N4L1 468 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 METTL6Q8TCB7 284 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 ACTRT2Q8TDY3 377 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 JADE3Q92613 823 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 C1QTNF3Q9BXJ4 246 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 SHCBP1LQ9BZQ2 653 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 TRIM8Q9BZR9 551 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 SLC6A15Q9H2J7 730 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 GSTO2Q9H4Y5 243 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 ZFP64Q9NPA5 681 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 KCNJ16Q9NPI9 418 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 RYDENQ9NUL5 291 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 VPS29Q9UBQ0 182 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 ZDHHC2Q9UIJ5 367 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 PSME2Q9UL46 239 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 PRPF19Q9UMS4 504 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 CFL2Q9Y281 166 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 FIS1Q9Y3D6 152 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 PCDHA9Q9Y5H5 950 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 HRH3Q9Y5N1 445 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 NPFFR2Q9Y5X5 522 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 CHCHD2Q9Y6H1 151 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 ZNF780BQ9Y6R6 833 aa8.88□□□□□ -0.99
NPLOC4-216ENST00000574344 C15orf38-AP3S2A0A0A6YYH1 394 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 GNG14A0A1W2PPG7 69 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 LRRC3CA6NJW4 275 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 MANBAO00462 879 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 ZNF195O14628 629 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 AZIN1O14977 448 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 GSC2O15499 205 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 PCDH7O60245 1069 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 HCN1O60741 890 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 WDR1O75083 606 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 ULK1O75385 1050 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 TRAPPC6AO75865 159 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 RFPL3SP0C7P2 107 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 COX4I1P13073 169 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 HSD3B1P14060 373 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 CSNK2A2P19784 350 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 HSD3B2P26439 372 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 EPHA3P29320 983 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 SSTR2P30874 369 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 ARRB2P32121 409 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 NUDT2P50583 147 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 FUT7Q11130 342 aa8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 CSTF3Q12996 717 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 EXOSC7Q15024 291 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-216ENST00000574344 HYAL4Q2M3T9 481 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms