RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 BBS4Q96RK4 519 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 ADOQ96SZ5 270 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 CLEC4MQ9H2X3 399 aaPredicted RBP19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 CALHM2Q9HA72 323 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 SLC35C2Q9NQQ7 365 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 FETUBQ9UGM5 382 aa19.24■□□□□ 0.67
CHRNB1-206ENST00000574054 KIAA1549Q9HCM3 1950 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 MBD3L4A6NDZ8 208 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 MBD3L3A6NE82 208 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 MBD3L5A6NJ08 208 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 H0Y3Z8 333 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 KIF2AO00139 706 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 ERN1O75460 977 aaKnown RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 ANXA4P09525 319 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FAM153BP0C7A2 387 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 CTSSP25774 331 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 IST1P53990 364 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 SLC29A2Q14542 456 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FBXL19-AS1Q494R0 122 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FAM153CQ494X1 144 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 POMZP3Q6PJE2 187 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 LARP4Q71RC2 724 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FAM9CQ8IZT9 166 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 C9orf106Q8NAJ2 232 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 MBD3L2Q8NHZ7 208 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 KIF18AQ8NI77 898 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FAM222BQ8WU58 562 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 TUBA1CQ9BQE3 449 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 RHOXF2Q9BQY4 288 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 OR2B2Q9GZK3 357 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FOLH1BQ9HBA9 442 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 MID1IP1Q9NPA3 183 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 TAS2R10Q9NYW0 307 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 FOXD3Q9UJU5 478 aaPredicted RBP19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 DKKL1Q9UK85 242 aa19.23■□□□□ 0.67
CHRNB1-206ENST00000574054 ABCB7O75027 752 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 TMIGD3P0DMS9 266 aaPredicted RBP19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 TCEA1P23193 301 aaKnown RBP19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 TACR1P25103 407 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 OPRM1P35372 400 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 DGKQP52824 942 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 ZNF155Q12901 538 aaPredicted RBP19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 EFR3AQ14156 821 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 IMPG1Q17R60 797 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 ENPP6Q6UWR7 440 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 NPSR1Q6W5P4 371 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 IFNEQ86WN2 208 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 PLCZ1Q86YW0 608 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 SLC44A2Q8IWA5 706 aaPredicted RBP19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 TRIM42Q8IWZ5 723 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 OR7G2Q8NG99 324 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 ZPLD1Q8TCW7 415 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 RMND5BQ96G75 393 aaPredicted RBP19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 SLC35A4Q96G79 324 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 VSTM2LQ96N03 204 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 GSTO2Q9H4Y5 243 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 RASSF1Q9NS23 344 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 OR10H1Q9Y4A9 318 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 WIF1Q9Y5W5 379 aa19.22■□□□□ 0.67
CHRNB1-206ENST00000574054 A6NNC1 897 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CRCPO75575 148 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CT45A8P0DMV1 189 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CT45A9P0DMV2 189 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 MYL2P10916 166 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CPN1P15169 458 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 MPIP34949 423 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CT45A2Q5DJT8 189 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 FBXW10Q5XX13 1052 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 OR5M10Q6IEU7 315 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 GALNT18Q6P9A2 607 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 KIF18BQ86Y91 864 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 GOT1L1Q8NHS2 421 aaPredicted RBP19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 EFHD2Q96C19 240 aaPredicted RBP19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 DTNBP1Q96EV8 351 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 LIME1Q9H400 295 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CCM2LQ9NUG4 571 aaPredicted RBP19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 TAS2R9Q9NYW1 312 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 FBXL2Q9UKC9 423 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 CBLCQ9ULV8 474 aa19.21■□□□□ 0.67
CHRNB1-206ENST00000574054 ABCA4P78363 2273 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 TUBAL3A6NHL2 446 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 PLOD3O60568 738 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 TSPAN2O60636 221 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 SRD5A2P31213 254 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 GSTM5P46439 218 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 SLCO1A2P46721 670 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 STARP49675 285 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 NCBP2P52298 156 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 FOXA1P55317 472 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 ZNF763Q0D2J5 394 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 C2orf80Q0P641 193 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 SH2D4BQ5SQS7 431 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 PLXDC2Q6UX71 529 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 GSPT2Q8IYD1 628 aaKnown RBP19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 CCDC126Q96EE4 140 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 SFXN2Q96NB2 322 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 DCDC2Q9UHG0 476 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 ST6GALNAC2Q9UJ37 374 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 EMCNQ9ULC0 261 aa19.2■□□□□ 0.66
CHRNB1-206ENST00000574054 ZFHX3Q15911 3703 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms