RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 BIRC5O15392 142 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 SLCO2B1O94956 709 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 CLDN14O95500 239 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 FAM107AO95990 144 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 C9P02748 559 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 MT-ND3P03897 115 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ALPPP05187 535 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 NELFEP18615 380 aaKnown RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ALDH3A1P30838 453 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 HOXD3P31249 432 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 CA7P43166 264 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 GPR1P46091 355 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 CCNG1P51959 295 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 GNGT1P63211 74 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 OTUD4Q01804 1114 aaKnown RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ZBTB17Q13105 803 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 C15orf59Q2T9L4 293 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 C1orf189Q5VU69 101 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF425Q6IV72 752 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 EMBQ6PCB8 327 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 IGFL3Q6UXB1 125 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 INTS8Q75QN2 995 aaKnown RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 IRF2BP2Q7Z5L9 587 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 TECPR1Q7Z6L1 1165 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 BIVMQ86UB2 503 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 FAM131BQ86XD5 332 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 DSELQ8IZU8 1212 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 DNAAF3Q8N9W5 541 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 PANX2Q96RD6 677 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 NAPGQ99747 312 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 NRTNQ99748 197 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 MAP3K3Q99759 626 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 FOXC2Q99958 501 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 SLX1AQ9BQ83 275 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 MRPL1Q9BYD6 325 aaKnown RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ZYG11BQ9C0D3 744 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 CENPHQ9H3R5 247 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 PIGMQ9H3S5 423 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 OSGEPL1Q9H4B0 414 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 NDUFA13Q9P0J0 144 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF624Q9P2J8 865 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ATXN10Q9UBB4 475 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 OR14J1Q9UGF5 321 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 KIAA1257Q9ULG3 409 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 C15orf41Q9Y2V0 281 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 PTGDR2Q9Y5Y4 395 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.95□□□□□ -1.622e-7■■■■■ 46.5
SF3B3-214ENST00000572365 IGLV3-10A0A075B6K4 115 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 OR52A4PA6NMU1 304 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 M0QZ24 198 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SMAD9O15198 467 aaKnown RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ADAMDEC1O15204 470 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 KCNAB3O43448 404 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 KDELR3O43731 214 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 NDUFS7O75251 213 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 BMP15O95972 392 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 KLK3P07288 261 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 HOXC4P09017 264 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 PAEPP09466 180 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 MMP9P14780 707 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 CPA3P15088 417 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 STX2P32856 288 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 RANBP1P43487 201 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ACADSBP45954 432 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SUOXP51687 545 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 TDGF1P3P51864 188 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 UBASH3AP57075 661 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 CSNK2A1P68400 391 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ABRQ12979 859 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 CDO1Q16878 200 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 FRG2Q64ET8 278 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 TRNP1Q6NT89 227 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 FAM198BQ6UWH4 519 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SHISA6Q6ZSJ9 500 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 TMEM26Q6ZUK4 368 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 BZW1Q7L1Q6 419 aaKnown RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 TMEM110Q86TL2 294 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SLC9B2Q86UD5 537 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 DNAAF5Q86Y56 855 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 GALNT13Q8IUC8 556 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 PYROXD2Q8N2H3 581 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 BCORP1Q8N888 145 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 PRR26Q8N8Z3 221 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 EIF1ADQ8N9N8 165 aaKnown RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SMYD1Q8NB12 490 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 CLEC1AQ8NC01 280 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 CSNK2A3Q8NEV1 391 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 OIT3Q8WWZ8 545 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF606Q8WXB4 792 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF653Q96CK0 615 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF778Q96MU6 729 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF559Q9BR84 538 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 NLNQ9BYT8 704 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 TSGA10Q9BZW7 698 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 NSRP1Q9H0G5 558 aaKnown RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 FAM234AQ9H0X4 552 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 CXXC4Q9H2H0 198 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 MMADHCQ9H3L0 296 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms