RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 UGT3A2Q3SY77 523 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 WIPI1Q5MNZ9 446 aaPredicted RBP16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 CEP85LQ5SZL2 805 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 C1orf185Q5T7R7 199 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 TIGD3Q6B0B8 471 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 RTL6Q6ICC9 239 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 B3GNT6Q6ZMB0 384 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 LARP4Q71RC2 724 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■□□□□ 8.8
CTDNEP1-207ENST00000572043 ZNF551Q7Z340 670 aaPredicted RBP16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 MCEMP1Q8IX19 187 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 TMCO6Q96DC7 493 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 CCT7Q99832 543 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 TTYH2Q9BSA4 534 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 STMN4Q9H169 189 aaPredicted RBP16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 SERHLQ9NQF3 203 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 TAS2R7Q9NYW3 318 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 SH3BP4Q9P0V3 963 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 ZDHHC2Q9UIJ5 367 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 RAB21Q9UL25 225 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 WBP11Q9Y2W2 641 aaKnown RBP16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 DOPEY1Q5JWR5 2465 aa16.25■□□□□ 0.19
CTDNEP1-207ENST00000572043 NPIPB8E9PQR5 432 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 SNPHO15079 494 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 PDPK1O15530 556 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 CTIFO43310 598 aaKnown RBP16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 PEX11AO75192 247 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 FGF4P08620 206 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 GLI4P10075 376 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 EFNA1P20827 205 aaPredicted RBP16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 PTPN6P29350 595 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 CHRNB4P30926 498 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 GPC1P35052 558 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 RFX3P48380 749 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 ZNF385BQ569K4 471 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 SLC30A6Q6NXT4 461 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 ACAD11Q709F0 780 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 YRDCQ86U90 279 aaKnown RBP16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 NUDCD3Q8IVD9 361 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 ASB5Q8WWX0 329 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 PPCDCQ96CD2 204 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 ELP4Q96EB1 424 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 METTL2AQ96IZ6 378 aaKnown RBP16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 UBQLN3Q9H347 655 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 REEP4Q9H6H4 257 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 EQTNQ9NQ60 294 aa16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 C19orf53Q9UNZ5 99 aaPredicted RBP16.24■□□□□ 0.19
CTDNEP1-207ENST00000572043 UTP20O75691 2785 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 OR6C70A6NIJ9 312 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 C17orf51A8MQB3 221 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 TSPAN2O60636 221 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 WDR1O75083 606 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 LYPLA1O75608 230 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 HPNP05981 417 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 TCEA1P23193 301 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 ELAVL4P26378 380 aaKnown RBP16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 ETV4P43268 484 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 SERPINB4P48594 390 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 PRKAG1P54619 331 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 WNT3P56703 355 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 PSG6Q00889 435 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 CES4AQ5XG92 561 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 OR5M10Q6IEU7 315 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 RNF165Q6ZSG1 346 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 SZRD1Q7Z422 152 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 EXOC3L1Q86VI1 746 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 SLC35A4Q96G79 324 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 FCRL1Q96LA6 429 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 C3orf30Q96M34 536 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 ZIM3Q96PE6 472 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 C1orf50Q9BV19 199 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 RUBCNLQ9H714 662 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 ZNF395Q9H8N7 513 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 NBPF19A0A087WUL8 3843 aa16.23■□□□□ 0.19
CTDNEP1-207ENST00000572043 A0A087WV62 115 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 A0A0G2JNJ9 132 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 PLOD2O00469 737 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 ABCB7O75027 752 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 HSPA4LO95757 839 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 BCKDHAP12694 445 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 SERPINB5P36952 375 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 ADH7P40394 386 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 CRYZQ08257 329 aaKnown RBP16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 SNTA1Q13424 505 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 EFR3AQ14156 821 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 CHI3L2Q15782 390 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 ULK2Q8IYT8 1036 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 OR2L13Q8N349 312 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 WDSUB1Q8N9V3 476 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 FAM83FQ8NEG4 500 aaPredicted RBP16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 LILRB4Q8NHJ6 448 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 NTNG2Q96CW9 530 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 PPP1R36Q96LQ0 422 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 PPP3R2Q96LZ3 170 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 TIMP4Q99727 224 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 KCNK9Q9NPC2 374 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 FLRT3Q9NZU0 649 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 Q9UFV3 132 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 CAMK2AQ9UQM7 478 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 TMED5Q9Y3A6 229 aa16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 MYO7BQ6PIF6 2116 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms