RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FNDC11Q9BVV2 318 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 HINT2Q9BX68 163 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 C1QTNF1Q9BXJ1 281 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 KLF16Q9BXK1 252 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 NMNAT2Q9BZQ4 307 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TM6SF2Q9BZW4 377 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 MAGT1Q9H0U3 335 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 VCXQ9H320 206 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ATXN3LQ9H3M9 355 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 FAM83DQ9H4H8 585 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TRABDQ9H4I3 376 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NSUN3Q9H649 340 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 ACSS3Q9H6R3 686 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SSU72Q9NP77 194 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 SAR1AQ9NR31 198 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 TLR9Q9NR96 1032 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ABCB10Q9NRK6 738 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 UFSP2Q9NUQ7 469 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ZNF701Q9NV72 531 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 RBM22Q9NW64 420 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMG6-208ENST00000570874 TMEM248Q9NWD8 314 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC2A8Q9NY64 477 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 AHSPQ9NZD4 102 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 CNOT2Q9NZN8 540 aaKnown RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 CD274Q9NZQ7 290 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 SLC17A7Q9P2U7 560 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 STOML1Q9UBI4 398 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LGALS13Q9UHV8 139 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ERRFI1Q9UJM3 462 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 GDF2Q9UK05 429 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 UTS2RQ9UKP6 389 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ZDHHC8Q9ULC8 765 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMG6-208ENST00000570874 CLEC4EQ9ULY5 219 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 PLAGL1Q9UM63 463 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 ZNF175Q9Y473 711 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 PCDHGC4Q9Y5F7 938 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 NUP214P35658 2090 aaPredicted RBP3.35□□□□□ -1.87
SMG6-208ENST00000570874 REV3LO60673 3130 aa3.35□□□□□ -1.87
SMG6-208ENST00000570874 LOC102723971A0A1B0GUV8 181 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 A0A1W2PQ67 120 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FBLL1A6NHQ2 334 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 EPOPA6NHQ4 379 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FAM159BA6NKW6 160 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 AQP7P3A6NL99 342 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 A8MUA0 341 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C1QTNF9BB2RNN3 333 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TRIM49D1C9J1S8 452 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C9JVG2 144 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ANKRD65E5RJM6 399 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C1QTNF3-AMACRE9PGA6 284 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 F5H5T6 163 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 WWP2O00308 870 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MATN2O00339 956 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CCL22O00626 93 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FGF10O15520 208 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 NDUFS4O43181 175 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 BUD23O43709 281 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 DUX1O43812 170 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 EIF4EBP3O60516 100 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 SNAP91O60641 907 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TBL1XO60907 577 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MOSPD3O75425 235 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PMPCBO75439 489 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ERN1O75460 977 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 PRSS23O95084 383 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 UNC5CO95185 931 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 OR6A2O95222 327 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ZWINTO95229 277 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ANP32DO95626 131 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 AP2A1O95782 977 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CD160O95971 181 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 BCL10O95999 233 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SERPINA5P05154 406 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C8AP07357 584 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 GSTM1P09488 218 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 DBTP11182 482 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 DRD2P14416 443 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ZNF44P15621 663 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 EPCAMP16422 314 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MAGP20916 626 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FUT4P22083 530 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TEAD1P28347 426 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 HOXD9P28356 352 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 GABRR2P28476 465 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 BDKRB2P30411 391 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TIA1P31483 386 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMG6-208ENST00000570874 ADRA1AP35348 466 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 P2RY2P41231 377 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 VIPR2P41587 438 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PTDSS1P48651 473 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 CDK9P50750 372 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 CNN1P51911 297 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 NUP107P57740 925 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CXCR4P61073 352 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MXRA7P84157 204 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PPP2R2BQ00005 443 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 BDH1Q02338 343 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CHRNB3Q05901 458 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SNTA1Q13424 505 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms