RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 ZNF354BQ96LW1 612 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 C3orf30Q96M34 536 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 C7orf26Q96N11 449 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 DMRTA2Q96SC8 542 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 SERPINI1Q99574 410 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 TBCDQ9BTW9 1192 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 MRPL1Q9BYD6 325 aaKnown RBP6.61□□□□□ -1.35
CNOT1-218ENST00000569732 ZNF700Q9H0M5 742 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 DDX31Q9H8H2 851 aaKnown RBP6.61□□□□□ -1.35
CNOT1-218ENST00000569732 CLK4Q9HAZ1 481 aaKnown RBP6.61□□□□□ -1.35
CNOT1-218ENST00000569732 SLCO1B3Q9NPD5 702 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 MKKSQ9NPJ1 570 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-218ENST00000569732 LANCL2Q9NS86 450 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 INTS9Q9NV88 658 aaKnown RBP6.61□□□□□ -1.35
CNOT1-218ENST00000569732 THAP1Q9NVV9 213 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 KCNN3Q9UGI6 736 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 CLDN16Q9Y5I7 305 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 NIPBLQ6KC79 2804 aaeCLIP6.61□□□□□ -1.35
CNOT1-218ENST00000569732 VPS13CQ709C8 3753 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 SPTBP11277 2137 aa6.61□□□□□ -1.35
CNOT1-218ENST00000569732 URADA6NGE7 173 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ACOT7O00154 380 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 LSM1O15116 133 aaKnown RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 CHST10O43529 356 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ASNA1O43681 348 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 RSL1D1O76021 490 aaKnown RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 HEXBP07686 556 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 CELA2AP08217 269 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 HIST1H1TP22492 207 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 RPL14P50914 215 aaKnown RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 IST1P53990 364 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 MTTPP55157 894 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ERVFRD-1P60508 538 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 OLR1P78380 273 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 PHEXP78562 749 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 BTKQ06187 659 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TUBA3CQ13748 450 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 PDCD1Q15116 288 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 HSP90B2PQ58FF3 399 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ACER2Q5QJU3 275 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ATG16L1Q676U5 607 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TTC19Q6DKK2 380 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TMEM211Q6ICI0 200 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 OR4C11Q6IEV9 310 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TRIM40Q6P9F5 258 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TUBA3EQ6PEY2 450 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 NCCRP1Q6ZVX7 275 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 COMMD6Q7Z4G1 85 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TMEM200AQ86VY9 491 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 DOLPP1Q86YN1 238 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 SIAH3Q8IW03 269 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 HORMAD2Q8N7B1 307 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ACOT4Q8N9L9 421 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 MDS2Q8NDY4 140 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 PPP1R14CQ8TAE6 165 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 AGR3Q8TD06 166 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 RGMAQ96B86 450 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 MMABQ96EY8 250 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 SCMH1Q96GD3 660 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 IMMP1LQ96LU5 166 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 MAGEB18Q96M61 343 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 KCNC2Q96PR1 638 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 SERINC2Q96SA4 455 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 MAPKAP1Q9BPZ7 522 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ZNF559Q9BR84 538 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 NPLQ9BXD5 320 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-218ENST00000569732 CCDC134Q9H6E4 229 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ANKHQ9HCJ1 492 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 HCN3Q9P1Z3 774 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 TRPC4Q9UBN4 977 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 VPS29Q9UBQ0 182 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 GIMAP2Q9UG22 337 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ADAM29Q9UKF5 820 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 EDARQ9UNE0 448 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 SLC12A4Q9UP95 1085 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ASB4Q9Y574 426 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 ANKRD12Q6UB98 2062 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 HEATR5BQ9P2D3 2071 aa6.6□□□□□ -1.35
CNOT1-218ENST00000569732 MDC1Q14676 2089 aaKnown RBP6.59□□□□□ -1.35
CNOT1-218ENST00000569732 IGKV3D-11A0A0A0MRZ8 115 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 NUDT19A8MXV4 375 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 NPIPA5E9PKD4 350 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 SLC28A1O00337 649 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 CYR61O00622 381 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 SDHDO14521 159 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 ADAM10O14672 748 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 EDF1O60869 148 aaKnown RBP6.59□□□□□ -1.35
CNOT1-218ENST00000569732 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-218ENST00000569732 WISP2O76076 250 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 LINC00032P0C843 101 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 C8orf89P0DMQ9 161 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 ALOX15P16050 662 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-218ENST00000569732 CHRNB4P30926 498 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 SSR2P43308 183 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 AVPR1BP47901 424 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 RAP1GDS1P52306 607 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.35
CNOT1-218ENST00000569732 LIM2P55344 173 aa6.59□□□□□ -1.35
CNOT1-218ENST00000569732 HNRNPH2P55795 449 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms