RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ARHGAP24Q8N264 748 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 SLC16A11Q8NCK7 471 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 SIMC1Q8NDZ2 872 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 DOK4Q8TEW6 326 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 SLC9A6Q92581 669 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 CPPED1Q9BRF8 314 aaPredicted RBP21.7■■□□□ 1.06
RAB40C-212ENST00000569575 G6PC3Q9BUM1 346 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 CDCP1Q9H5V8 836 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 EQTNQ9NQ60 294 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 POLE3Q9NRF9 147 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 STMN3Q9NZ72 180 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 TUBD1Q9UJT1 453 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 OR10H1Q9Y4A9 318 aa21.7■■□□□ 1.06
RAB40C-212ENST00000569575 MKRN2OSH3BPM6 223 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 ITGA10O75578 1167 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 UBOX5O94941 541 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 CBX6O95503 412 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 T-ENOLP0DO92 83 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 SLC6A2P23975 617 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 GABRA3P34903 492 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 KRT20P35900 424 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 PIGAP37287 484 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 SSR4P51571 173 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 MVDP53602 400 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 RBBP4Q09028 425 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 BNIP1Q12981 228 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 DECR1Q16698 335 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 SLC44A2Q8IWA5 706 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-212ENST00000569575 SLC34A3Q8N130 599 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 CHDHQ8NE62 594 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-212ENST00000569575 GPR151Q8TDV0 419 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 TM9SF4Q92544 642 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 JADE3Q92613 823 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 OR7D2Q96RA2 312 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 SMAD5Q99717 465 aaKnown RBP21.69■■□□□ 1.06
RAB40C-212ENST00000569575 NXF5Q9H1B4 397 aaKnown RBP21.69■■□□□ 1.06
RAB40C-212ENST00000569575 OR51I1Q9H343 314 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 PRORYQ9H606 182 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 KAT8Q9H7Z6 458 aaKnown RBP21.69■■□□□ 1.06
RAB40C-212ENST00000569575 TRIM45Q9H8W5 580 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-212ENST00000569575 IL1RL2Q9HB29 575 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 SPAG4Q9NPE6 437 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 CALML5Q9NZT1 146 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 L3MBTL1Q9Y468 752 aa21.69■■□□□ 1.06
RAB40C-212ENST00000569575 B2RBV5 119 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 PRKNO60260 465 aaPredicted RBP21.68■■□□□ 1.06
RAB40C-212ENST00000569575 CELA2AP08217 269 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 CASRP41180 1078 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 CRATP43155 626 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 NR0B1P51843 470 aaKnown RBP21.68■■□□□ 1.06
RAB40C-212ENST00000569575 PNLIPRP2P54317 469 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 RPP38P78345 283 aaKnown RBP21.68■■□□□ 1.06
RAB40C-212ENST00000569575 MXRA7P84157 204 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 RHDQ02161 417 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 MFAP5Q13361 173 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 GTDC1Q4AE62 458 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 PRAMEF8Q5VWM4 474 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 PRAMEF7Q5VXH5 474 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 HEPHL1Q6MZM0 1159 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 IGFL2Q6UWQ7 119 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 SLC30A8Q8IWU4 369 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 HORMAD2Q8N7B1 307 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 COX18Q8N8Q8 333 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 C16orf58Q96GQ5 468 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 SGCZQ96LD1 299 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 ECSITQ9BQ95 431 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 ADNPQ9H2P0 1102 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 TMEM38AQ9H6F2 299 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 ZNF552Q9H707 407 aaPredicted RBP21.68■■□□□ 1.06
RAB40C-212ENST00000569575 HHATLQ9HCP6 504 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 CBLCQ9ULV8 474 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 DTX4Q9Y2E6 619 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 NPFFR2Q9Y5X5 522 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 ACACBO00763 2458 aa21.68■■□□□ 1.06
RAB40C-212ENST00000569575 DNAJB5O75953 348 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 OR2J2O76002 312 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 ACP2P11117 423 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 DSTNP60981 165 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 POU6F2P78424 691 aaPredicted RBP21.67■■□□□ 1.06
RAB40C-212ENST00000569575 TBR1Q16650 682 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 DUSP5Q16690 384 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 ARHGAP11BQ3KRB8 267 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 FAM110BQ8TC76 370 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 AURKBQ96GD4 344 aaPredicted RBP21.67■■□□□ 1.06
RAB40C-212ENST00000569575 TRNT1Q96Q11 434 aaKnown RBP21.67■■□□□ 1.06
RAB40C-212ENST00000569575 RASL10BQ96S79 203 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 SECISBP2Q96T21 854 aaKnown RBP21.67■■□□□ 1.06
RAB40C-212ENST00000569575 ABCD2Q9UBJ2 740 aa21.67■■□□□ 1.06
RAB40C-212ENST00000569575 TPRP12270 2363 aaKnown RBP21.67■■□□□ 1.06
RAB40C-212ENST00000569575 OR6C70A6NIJ9 312 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 WWP2O00308 870 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 HMGN4O00479 90 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 ABCD3P28288 659 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 HLCSP50747 726 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 CORO7P57737 925 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 PSME3P61289 254 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 EFR3AQ14156 821 aa21.66■■□□□ 1.06
RAB40C-212ENST00000569575 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.66■■□□□ 1.06
RAB40C-212ENST00000569575 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.66■■□□□ 1.06
RAB40C-212ENST00000569575 ERICH5Q6P6B1 374 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms