RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 BICRALQ6AI39 1079 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 ST6GALNAC3Q8NDV1 305 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 VPS37AQ8NEZ2 397 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 OR4N2Q8NGD1 307 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 SPPL2AQ8TCT8 520 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 PAQR8Q8TEZ7 354 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 FAM120BQ96EK7 910 aaKnown RBP11.78□□□□□ -0.52
CDT1-203ENST00000569140 RMND5BQ96G75 393 aaPredicted RBP11.78□□□□□ -0.52
CDT1-203ENST00000569140 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
CDT1-203ENST00000569140 COL21A1Q96P44 957 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 ADOQ96SZ5 270 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 SLX1AQ9BQ83 275 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 TTTY12Q9BZ98 90 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 CXorf36Q9H7Y0 433 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 NEUROD4Q9HD90 331 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 TUBA8Q9NY65 449 aaPredicted RBP11.78□□□□□ -0.52
CDT1-203ENST00000569140 CNIH4Q9P003 139 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 CBLCQ9ULV8 474 aa11.78□□□□□ -0.52
CDT1-203ENST00000569140 CHCHD2Q9Y6H1 151 aaPredicted RBP11.78□□□□□ -0.52
CDT1-203ENST00000569140 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.78□□□□□ -0.52
CDT1-203ENST00000569140 RNF103-CHMP3A0A140T963 221 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 RNASET2O00584 256 aaKnown RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 ZNF195O14628 629 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 UGT2B11O75310 529 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 SLC22A3O75751 556 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 PDE9AO76083 593 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 TGDSO95455 350 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 ALOX5P09917 674 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 CT45A8P0DMV1 189 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 CT45A9P0DMV2 189 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 DGKQP52824 942 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 PSG6Q00889 435 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 RBPJQ06330 500 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 SF3A3Q12874 501 aaKnown RBP eCLIP11.77□□□□□ -0.537e-9■■□□□ 12
CDT1-203ENST00000569140 LASP1Q14847 261 aaKnown RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 TOMM20Q15388 145 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 DECR1Q16698 335 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 PDCD4Q53EL6 469 aaKnown RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 CT45A2Q5DJT8 189 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 ANGPTL8Q6UXH0 198 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 NUP54Q7Z3B4 507 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 CAMKMTQ7Z624 323 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 GALNT10Q86SR1 603 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 MIER2Q8N344 545 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 CDRT4Q8N9R6 151 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 OR56A1Q8NGH5 318 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 PIK3R3Q92569 461 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 TESCQ96BS2 214 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 TMCO6Q96DC7 493 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 TEX37Q96LM6 180 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 ZNF597Q96LX8 424 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 RILPQ96NA2 401 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 NODALQ96S42 347 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 OSBPL11Q9BXB4 747 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 DEFB127Q9H1M4 99 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 CLMPQ9H6B4 373 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 EXO5Q9H790 373 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 RYDENQ9NUL5 291 aaKnown RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 B4GALT7Q9UBV7 327 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 SH3BGRL2Q9UJC5 107 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 DCTN4Q9UJW0 460 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 MRTO4Q9UKD2 239 aaKnown RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 CNOT11Q9UKZ1 510 aaKnown RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 FAF1Q9UNN5 650 aaPredicted RBP11.77□□□□□ -0.53
CDT1-203ENST00000569140 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 GPR45Q9Y5Y3 372 aa11.77□□□□□ -0.53
CDT1-203ENST00000569140 A0A0G2JND7 137 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 GXYLT2A0PJZ3 443 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 C2orf72A6NCS6 295 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 PRAMEF25A6NGN4 478 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 GNB5O14775 395 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 ANKRD28O15084 1053 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 TO15178 435 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 EDF1O60869 148 aaKnown RBP11.76□□□□□ -0.53
CDT1-203ENST00000569140 KCNH1O95259 989 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 PSMG1O95456 288 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 CBX6O95503 412 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 IFI6P09912 130 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDT1-203ENST00000569140 ACP2P11117 423 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 NAGAP17050 411 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 GDF1P27539 372 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 CHI3L1P36222 383 aaPredicted RBP11.76□□□□□ -0.53
CDT1-203ENST00000569140 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
CDT1-203ENST00000569140 HBA1P69905 142 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 PSPHP78330 225 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 MRPS22P82650 360 aaKnown RBP11.76□□□□□ -0.53
CDT1-203ENST00000569140 HSF1Q00613 529 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 GAB1Q13480 694 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 EFR3AQ14156 821 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 RNFT1Q5M7Z0 435 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 TBCELQ5QJ74 424 aa11.76□□□□□ -0.53
CDT1-203ENST00000569140 ZNF324BQ6AW86 544 aaPredicted RBP11.76□□□□□ -0.53
CDT1-203ENST00000569140 MFSD12Q6NUT3 480 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms