RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 UGT2B11O75310 529 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 ACP2P11117 423 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 EDN3P14138 238 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 CNR1P21554 472 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 MDH1P40925 334 aaKnown RBP11.4□□□□□ -0.58
RNF40-211ENST00000567365 PTGDSP41222 190 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 MEOX1P50221 254 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 NRG3P56975 720 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 GPR85P60893 370 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 PSPHP78330 225 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 GUCY1A3Q02108 690 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 GAB1Q13480 694 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 HYAL4Q2M3T9 481 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 FAM174BQ3ZCQ3 159 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 CYP27C1Q4G0S4 372 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 SLC22A10Q63ZE4 541 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 NXNQ6DKJ4 435 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 MFSD12Q6NUT3 480 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 ZCCHC12Q6PEW1 402 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 FAM180AQ6UWF9 173 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 NUP54Q7Z3B4 507 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 WDR53Q7Z5U6 358 aaPredicted RBP11.4□□□□□ -0.58
RNF40-211ENST00000567365 FUNDC1Q8IVP5 155 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 CHERPQ8IWX8 916 aaKnown RBP11.4□□□□□ -0.58
RNF40-211ENST00000567365 PRR22Q8IZ63 422 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 GLB1L3Q8NCI6 653 aaPredicted RBP11.4□□□□□ -0.58
RNF40-211ENST00000567365 NUP43Q8NFH3 380 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 OR4N2Q8NGD1 307 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 RFWD2Q8NHY2 731 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 SFXN5Q8TD22 340 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 OMA1Q96E52 524 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 MAGED4Q96JG8 741 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 MARK4Q96L34 752 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 CCDC115Q96NT0 180 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 MS4A4EQ96PG1 132 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 ZNF317Q96PQ6 595 aaPredicted RBP11.4□□□□□ -0.58
RNF40-211ENST00000567365 ZNF385DQ9H6B1 395 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 SERHLQ9NQF3 203 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 AGPAT4Q9NRZ5 378 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 SACM1LQ9NTJ5 587 aa11.4□□□□□ -0.58
RNF40-211ENST00000567365 FAM120CQ9NX05 1096 aaKnown RBP11.4□□□□□ -0.58
RNF40-211ENST00000567365 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 ZNF407Q9C0G0 2248 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 CLEC18AA5D8T8 446 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 LRRC3CA6NJW4 275 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 C9JVG2 144 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 KLRC4-KLRK1H3BQV0 150 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 POLR3GO15318 223 aaPredicted RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 TRIM3O75382 744 aaPredicted RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 CRYABP02511 175 aaKnown RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 PGRP06401 933 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 GPC1P35052 558 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 PIGAP37287 484 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 CASP3P42574 277 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 DNASE1L1P49184 302 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 MAN2A2P49641 1150 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 DGKQP52824 942 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 ZNF155Q12901 538 aaPredicted RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 PGS1Q32NB8 556 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 ANXA8L1Q5VT79 327 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 FNDC7Q5VTL7 733 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 CLEC18BQ6UXF7 455 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 ACAD11Q709F0 780 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 SLC44A2Q8IWA5 706 aaPredicted RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 CDRT4Q8N9R6 151 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 CLEC18CQ8NCF0 446 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 SLC16A11Q8NCK7 471 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 ST6GALNAC3Q8NDV1 305 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 OR9I1Q8NGQ6 314 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 FAM110BQ8TC76 370 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 TMBIM1Q969X1 311 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 C16orf58Q96GQ5 468 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 NODALQ96S42 347 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 ANGPTL4Q9BY76 406 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 C3orf14Q9HBI5 128 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 SLC52A3Q9NQ40 469 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 OLAHQ9NV23 265 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 GIN1Q9NXP7 522 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 TUBA8Q9NY65 449 aaPredicted RBP11.39□□□□□ -0.59
RNF40-211ENST00000567365 BTNL2Q9UIR0 455 aa11.39□□□□□ -0.59
RNF40-211ENST00000567365 TP53I11O14683 189 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 ABCB7O75027 752 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 IL33O95760 270 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 IGKV1D-16P01601 117 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 C1QCP02747 245 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 HMGN2P05204 90 aaKnown RBP11.38□□□□□ -0.59
RNF40-211ENST00000567365 PTPN6P29350 595 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 S100A3P33764 101 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
RNF40-211ENST00000567365 ATP4BP51164 291 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 PNLIPRP2P54317 469 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 GAS1P54826 345 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 NME5P56597 212 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
RNF40-211ENST00000567365 PRR5P85299 388 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 PLCXD2Q0VAA5 305 aa11.38□□□□□ -0.59
RNF40-211ENST00000567365 DUSP5Q16690 384 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms