RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 AGR2O95994 175 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 P04436 131 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 HMGN2P05204 90 aaKnown RBP11.22□□□□□ -0.61
SF3B3-208ENST00000567250 ALOX5P09917 674 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 ADSLP30566 484 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-208ENST00000567250 CHI3L1P36222 383 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-208ENST00000567250 SEC24CP53992 1094 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GYS2P54840 703 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 CORO7P57737 925 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 TXNL4AP83876 142 aaKnown RBP11.22□□□□□ -0.61
SF3B3-208ENST00000567250 PSG6Q00889 435 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 C19orf57Q0VDD7 668 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 EFR3AQ14156 821 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 LASP1Q14847 261 aaKnown RBP11.22□□□□□ -0.61
SF3B3-208ENST00000567250 MAPRE2Q15555 327 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 DECR1Q16698 335 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF791Q3KP31 576 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-208ENST00000567250 AGKQ53H12 422 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 C6orf10Q5SRN2 563 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 SPINK14Q6IE38 97 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 CDC73Q6P1J9 531 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 BLOC1S3Q6QNY0 202 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GK5Q6ZS86 529 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GALNTL5Q7Z4T8 443 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 COX18Q8N8Q8 333 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 CATSPER1Q8NEC5 780 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 OR5AK3PQ8NH89 298 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GPR151Q8TDV0 419 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 NUDT8Q8WV74 236 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 SLC9A6Q92581 669 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GIMAP5Q96F15 307 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 STACQ99469 402 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 SLC35A5Q9BS91 424 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 ACTRT3Q9BYD9 372 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF385DQ9H6B1 395 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 KLHL1Q9NR64 748 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 DUSP22Q9NRW4 184 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 GIN1Q9NXP7 522 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 CBLCQ9ULV8 474 aa11.22□□□□□ -0.61
SF3B3-208ENST00000567250 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 OR6C70A6NIJ9 312 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 DUXAA6NLW8 204 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 TTLL8A6PVC2 850 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 ANGPT2O15123 496 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 SLC22A2O15244 555 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF354AO60765 605 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 CCDC22O60826 627 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 NKX2-2O95096 273 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 AK1P00568 194 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 CRYABP02511 175 aaKnown RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 CT45A8P0DMV1 189 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 CT45A9P0DMV2 189 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 ZFP36L2P47974 494 aaKnown RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 TRPC1P48995 793 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 KHKP50053 298 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 PHC1P78364 1004 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 CT45A2Q5DJT8 189 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 SLC22A10Q63ZE4 541 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 LYPD8Q6UX82 237 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 ANGPTL8Q6UXH0 198 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 NPSR1Q6W5P4 371 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 DNAJC14Q6Y2X3 702 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 NUP54Q7Z3B4 507 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 PRR22Q8IZ63 422 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 FBXW8Q8N3Y1 598 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF843Q8N446 348 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 CPSF7Q8N684 471 aaKnown RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 Q8NA96 180 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 POGLUT1Q8NBL1 392 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 DNAJB8Q8NHS0 232 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 FBXO30Q8TB52 745 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 ADAMTS15Q8TE58 950 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 PAQR8Q8TEZ7 354 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 TSPEARQ8WU66 669 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 DIO2Q92813 273 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 HOXB13Q92826 284 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-208ENST00000567250 TMBIM1Q969X1 311 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 TMCO6Q96DC7 493 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 NEURL3Q96EH8 262 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 SLC35A4Q96G79 324 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 COL21A1Q96P44 957 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 LUZP4Q9P127 313 aa11.21□□□□□ -0.61
SF3B3-208ENST00000567250 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.62
SF3B3-208ENST00000567250 NUP214P35658 2090 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-208ENST00000567250 A0A1W2PP18 115 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ACOT7O00154 380 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 SUV39H1O43463 412 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ASNA1O43681 348 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 REM1O75628 298 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 KRT75O95678 551 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 PRB1P04280 392 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 ACP2P11117 423 aa11.2□□□□□ -0.62
SF3B3-208ENST00000567250 LCN1P31025 176 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms