RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 LSSP48449 732 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 ILF3Q12906 894 aaKnown RBP eCLIP17.53■□□□□ 0.4
MSLN-207ENST00000566549 KIF18BQ86Y91 864 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 OR4K14Q8NGD5 310 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 OR5T3Q8NGG3 340 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 NT5CQ8TCD5 201 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 LRR1Q96L50 414 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 GPR52Q9Y2T5 361 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 PCDHGA3Q9Y5H0 932 aa17.53■□□□□ 0.4
MSLN-207ENST00000566549 FAM170BA6NMN3 283 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 B3GALT2O43825 422 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 CBFA2T3O75081 653 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 PCYT1AP49585 367 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 ALDH6A1Q02252 535 aaKnown RBP17.52■□□□□ 0.4
MSLN-207ENST00000566549 SSX1Q16384 188 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 CLEC12AQ5QGZ9 265 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 MFSD12Q6NUT3 480 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 PRICKLE2Q7Z3G6 844 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 SLC22A18ASQ8N1D0 253 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 OR52P1PQ8NH57 321 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 FAM3CQ92520 227 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 FAM46AQ96IP4 442 aaKnown RBP17.52■□□□□ 0.4
MSLN-207ENST00000566549 DACH2Q96NX9 599 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 TRNT1Q96Q11 434 aaKnown RBP17.52■□□□□ 0.4
MSLN-207ENST00000566549 POLE4Q9NR33 117 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 STARD5Q9NSY2 213 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 TBCCD1Q9NVR7 557 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 GIN1Q9NXP7 522 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 NDOR1Q9UHB4 597 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 KNL1Q8NG31 2342 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 METTL15A6NJ78 407 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 CCNYL3P0C7X3 344 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 UGT2B10P36537 528 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 GIPRP48546 466 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 PPP1CAP62136 330 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 TUBA1BP68363 451 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 FAM214AQ32MH5 1076 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 TRMT12Q53H54 448 aaKnown RBP17.52■□□□□ 0.4
MSLN-207ENST00000566549 MFSD4BQ5TF39 518 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 C1orf94Q6P1W5 598 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 TUBA1AQ71U36 451 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 ZNF554Q86TJ5 538 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 TMEM80Q96HE8 168 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 OPALINQ96PE5 141 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 DAPP1Q9UN19 280 aa17.52■□□□□ 0.4
MSLN-207ENST00000566549 CENPVL1A0A0U1RR11 272 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 BOLA2-SMG1P6H3BVE0 249 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 CCRL2O00421 344 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 CYP7B1O75881 506 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 SEMA4FO95754 770 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 PIPP12273 146 aaPredicted RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 MRPS21P82921 87 aaKnown RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 DNASE1L3Q13609 305 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 SNAPC1Q16533 368 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 ZNF730Q6ZMV8 503 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 TM4SF19Q96DZ7 209 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 MS4A4EQ96PG1 132 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 SERINC2Q96SA4 455 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 EXOSC4Q9NPD3 245 aaKnown RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 ADAP2Q9NPF8 381 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 RPL36Q9Y3U8 105 aaKnown RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 FUOMA2VDF0 154 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 H0YGG7 62 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 WWP2O00308 870 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 KIAA0513O60268 411 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 CSO75390 466 aaKnown RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 RGS8P57771 180 aaPredicted RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 ARF3P61204 181 aaPredicted RBP17.51■□□□□ 0.39
MSLN-207ENST00000566549 FRRS1Q6ZNA5 592 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 ZNF438Q7Z4V0 828 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 ATCAYQ86WG3 371 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 NKAIN4Q8IVV8 208 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 KBTBD8Q8NFY9 601 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 CPNE7Q9UBL6 633 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 PHF11Q9UIL8 331 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 LIPT1Q9Y234 373 aa17.51■□□□□ 0.39
MSLN-207ENST00000566549 H3BQ06 376 aaPredicted RBP17.5■□□□□ 0.39
MSLN-207ENST00000566549 ASNA1O43681 348 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 CSTF2P33240 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
MSLN-207ENST00000566549 COX10Q12887 443 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 C1orf61Q13536 156 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 DUSP5Q16690 384 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 SYT14P1Q58G82 188 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 ENTPD8Q5MY95 495 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 TMEM201Q5SNT2 666 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 PLEKHM3Q6ZWE6 761 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 CYP4Z2PQ8N1L4 340 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 AMER2Q8N7J2 671 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 TMEM52Q8NDY8 209 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 RERGQ96A58 199 aaPredicted RBP17.5■□□□□ 0.39
MSLN-207ENST00000566549 ARHGDIGQ99819 225 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 ZFYVE21Q9BQ24 234 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 CDADC1Q9BWV3 514 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 HRASLS2Q9NWW9 162 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 TRNAU1APQ9NX07 287 aaKnown RBP17.5■□□□□ 0.39
MSLN-207ENST00000566549 IL20RAQ9UHF4 553 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 TNFRSF10CO14798 259 aa17.5■□□□□ 0.39
MSLN-207ENST00000566549 ZSCAN9O15535 394 aaPredicted RBP17.5■□□□□ 0.39
MSLN-207ENST00000566549 TLX1P31314 330 aaPredicted RBP17.5■□□□□ 0.39
MSLN-207ENST00000566549 MAGEA8P43361 318 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms