RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 IGHV5-10-1A0A0J9YXX1 117 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 LOC100130705A0A1B0GUX0 176 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 DUXAA6NLW8 204 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 H0YAE9 185 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 GADD45GO95257 159 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 TNFAIP8O95379 198 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PABPC4LP0CB38 370 aaKnown RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PNLIPP16233 465 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 RHCEP18577 417 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 LIMS1P48059 325 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 EMDP50402 254 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ANXA11P50995 505 aaKnown RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PGDP52209 483 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PSG6Q00889 435 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 MAPK14Q16539 360 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ZNF311Q5JNZ3 666 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 EXOSC6Q5RKV6 272 aaKnown RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ATAD3BQ5T9A4 648 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 RNF220Q5VTB9 566 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 FAHD1Q6P587 224 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ARHGAP22Q7Z5H3 698 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 GALNT12Q8IXK2 581 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ZNF786Q8N393 782 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PIK3C3Q8NEB9 887 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 GPR151Q8TDV0 419 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ARRDC1-AS1Q9H2J1 176 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PIGUQ9H490 435 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PNPLA3Q9NST1 481 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 C3orf18Q9UK00 162 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 FAM32AQ9Y421 112 aaKnown RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 CLDN4O14493 209 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 NTN1O95631 604 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 LGI1O95970 557 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ITGA2P17301 1181 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 AVPR2P30518 371 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 GABRA3P34903 492 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 SKP1P63208 163 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 IGLV3-21P80748 117 aaPredicted RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 MAP4K2Q12851 820 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ZNF267Q14586 743 aaPredicted RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 SEC23BQ15437 767 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 GPR68Q15743 365 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 NPTX1Q15818 432 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 NNATQ16517 81 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ARHGAP11BQ3KRB8 267 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 CARFQ8N187 725 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ZNF321PQ8N8H1 164 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 IFI44Q8TCB0 444 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 TSLPQ969D9 159 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 NRBF2Q96F24 287 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 PTCHD1Q96NR3 888 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 BTBD2Q9BX70 525 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 RIBC2Q9H4K1 309 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 ZNF696Q9H7X3 374 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 BATF3Q9NR55 127 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 A4GNTQ9UNA3 340 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 LIPT1Q9Y234 373 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 MRPS33Q9Y291 106 aaKnown RBP10.57□□□□□ -0.72
LINC00562-201ENST00000566385 WDR45Q9Y484 360 aa10.57□□□□□ -0.72
LINC00562-201ENST00000566385 H3BNH8 94 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 PEX12O00623 359 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 MAGEA8P43361 318 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 RFX3P48380 749 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 CLK3P49761 638 aaKnown RBP10.56□□□□□ -0.72
LINC00562-201ENST00000566385 HMGA2P52926 109 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 RAPSNQ13702 412 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 MICAQ29983 383 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 MINDY4Q4G0A6 757 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 DCST2Q5T1A1 773 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 MFSD4BQ5TF39 518 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 FOXB2Q5VYV0 432 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 TTC33Q6PID6 262 aaPredicted RBP10.56□□□□□ -0.72
LINC00562-201ENST00000566385 CDRT4Q8N9R6 151 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 OR10G2Q8NGC3 310 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 GIPC3Q8TF64 312 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 RASSF5Q8WWW0 418 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 UBE2FQ969M7 185 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 OR6C1Q96RD1 312 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 DPYSL5Q9BPU6 564 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 NDC1Q9BTX1 674 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 CNPPD1Q9BV87 410 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 LRRN3Q9H3W5 708 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 APMAPQ9HDC9 416 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 KRT84Q9NSB2 600 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 KIF17Q9P2E2 1029 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 SERTAD3Q9UJW9 196 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 KCND3Q9UK17 655 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 ERVK-19Q9WJR5 959 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 NTNG1Q9Y2I2 539 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 A8MUA0 341 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 BMP10O95393 424 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 IFNA16P05015 189 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 ALPPP05187 535 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 TFAP2AP05549 437 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 CNR2P34972 360 aa10.56□□□□□ -0.72
LINC00562-201ENST00000566385 HSD17B7P56937 341 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms