RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 RGNQ15493 299 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 COL28A1Q2UY09 1125 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPG7-213ENST00000566221 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 PGAM4Q8N0Y7 254 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 ARMC10Q8N2F6 343 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 GALNT16Q8N428 558 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 BRIX1Q8TDN6 353 aaKnown RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 ADAMTS15Q8TE58 950 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 THAP3Q8WTV1 239 aaPredicted RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 TP53INP1Q96A56 240 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 C16orf58Q96GQ5 468 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 LCORQ96JN0 433 aaPredicted RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 OR7D2Q96RA2 312 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 YIPF4Q9BSR8 244 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 THUMPD3Q9BV44 507 aaKnown RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 OR51I1Q9H343 314 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 IKZF5Q9H5V7 419 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 Q9N2J8 555 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 AP3M1Q9Y2T2 418 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 GPR55Q9Y2T6 319 aaPredicted RBP13.7□□□□□ -0.22
SPG7-213ENST00000566221 PCDHGB3Q9Y5G1 929 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 KCNMB2Q9Y691 235 aa13.7□□□□□ -0.22
SPG7-213ENST00000566221 GSC2O15499 205 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 NME6O75414 186 aaPredicted RBP13.69□□□□□ -0.22
SPG7-213ENST00000566221 NKX2-2O95096 273 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 C1QCP02747 245 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 CT45A8P0DMV1 189 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 CT45A9P0DMV2 189 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 GPX2P18283 190 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 DRD5P21918 477 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 NRG3P56975 720 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 CORO7P57737 925 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 PSME3P61289 254 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 SLC25A3Q00325 362 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 PSG6Q00889 435 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 NNATQ16517 81 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 DUSP5Q16690 384 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 CT45A2Q5DJT8 189 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 RABL3Q5HYI8 236 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 COX20Q5RI15 118 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 TCTN3Q6NUS6 607 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 NPSR1Q6W5P4 371 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 WDR53Q7Z5U6 358 aaPredicted RBP13.69□□□□□ -0.22
SPG7-213ENST00000566221 SLC44A2Q8IWA5 706 aaPredicted RBP13.69□□□□□ -0.22
SPG7-213ENST00000566221 TAGAPQ8N103 731 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 SIRT6Q8N6T7 355 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 HORMAD2Q8N7B1 307 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 COX18Q8N8Q8 333 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 SLC16A11Q8NCK7 471 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 OR5D16Q8NGK9 328 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 SLC22A8Q8TCC7 542 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 GPR151Q8TDV0 419 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 SNRNP27Q8WVK2 155 aaKnown RBP13.69□□□□□ -0.22
SPG7-213ENST00000566221 APOBEC4Q8WW27 367 aaKnown RBP13.69□□□□□ -0.22
SPG7-213ENST00000566221 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 HSPBAP1Q96EW2 488 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 SPATA9Q9BWV2 254 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 NXF5Q9H1B4 397 aaKnown RBP13.69□□□□□ -0.22
SPG7-213ENST00000566221 PIGUQ9H490 435 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 MYOTQ9UBF9 498 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 OR10H1Q9Y4A9 318 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 EML6Q6ZMW3 1958 aa13.69□□□□□ -0.22
SPG7-213ENST00000566221 NBEAQ8NFP9 2946 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 HELZ2Q9BYK8 2649 aaKnown RBP13.68□□□□□ -0.22
SPG7-213ENST00000566221 MGAQ8IWI9 3026 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 TMEM200CA6NKL6 621 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 A8MUI8 341 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 HMGN4O00479 90 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 TO15178 435 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 AK1P00568 194 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 BMP2P12643 396 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 ETFAP13804 333 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 GABRA3P34903 492 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 TRHRP34981 398 aaPredicted RBP13.68□□□□□ -0.22
SPG7-213ENST00000566221 NR0B1P51843 470 aaKnown RBP13.68□□□□□ -0.22
SPG7-213ENST00000566221 SLC7A2P52569 658 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 CASP9P55211 416 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 DSTNP60981 165 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 SELPLGQ14242 412 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 MEP1AQ16819 746 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 CYP51A1Q16850 503 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 CYP27C1Q4G0S4 372 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 CRB2Q5IJ48 1285 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 RPS19BP1Q86WX3 136 aaKnown RBP13.68□□□□□ -0.22
SPG7-213ENST00000566221 PSMF1Q92530 271 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 CDS1Q92903 461 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 TMEM125Q96AQ2 219 aa13.68□□□□□ -0.22
SPG7-213ENST00000566221 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
SPG7-213ENST00000566221 ZNF354BQ96LW1 612 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms