RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CEP70Q8NHQ1 597 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 RELTQ969Z4 430 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 MAGED4Q96JG8 741 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 VSTM2LQ96N03 204 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 BTBD9Q96Q07 612 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 DUSP26Q9BV47 211 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 TTTY12Q9BZ98 90 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 BHLHE41Q9C0J9 482 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 IL1RL2Q9HB29 575 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 DDX18Q9NVP1 670 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 ZNF835Q9Y2P0 537 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 GPR45Q9Y5Y3 372 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 ASH1LQ9NR48 2969 aaKnown RBP12.71□□□□□ -0.38
HERPUD1-210ENST00000565966 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 FRG2CA6NGY1 282 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 TO15178 435 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC19A2O60779 497 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 EDF1O60869 148 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 ERN1O75460 977 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 PPM1BO75688 479 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 GLSO94925 669 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 TGDSO95455 350 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 LDLRP01130 860 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 ABCB1P08183 1280 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CT45A8P0DMV1 189 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CT45A9P0DMV2 189 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CASP6P55212 293 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 NME5P56597 212 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 PER3P56645 1201 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CORO7P57737 925 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 UFM1P61960 85 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 FOXO1Q12778 655 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 ZNF155Q12901 538 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 HYAL4Q2M3T9 481 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 PGS1Q32NB8 556 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 LSM12Q3MHD2 195 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CT45A2Q5DJT8 189 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CMPK2Q5EBM0 449 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 PRAMEF20Q5VT98 475 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 C1QL3Q5VWW1 255 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 OR4F3Q6IEY1 312 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 NPSR1Q6W5P4 371 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 NUP54Q7Z3B4 507 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 SPPL2AQ8TCT8 520 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 OR5P2Q8WZ92 322 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 DIO2Q92813 273 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 TESCQ96BS2 214 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 TEX37Q96LM6 180 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 ZDHHC11Q9H8X9 412 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 PROK2Q9HC23 129 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 SIRT3Q9NTG7 399 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 TUBA8Q9NY65 449 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 NTMQ9P121 344 aa12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 PHF3Q92576 2039 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-210ENST00000565966 NCOA6Q14686 2063 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PCNX3Q9H6A9 2034 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 FAM166BA8MTA8 275 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 UBDO15205 165 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 EMC8O43402 210 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 CDC40O60508 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 SCN2BO60939 215 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 C6orf47O95873 294 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 ABOP16442 354 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 IL12AP29459 219 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 CA7P43166 264 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 IDH3AP50213 366 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 CLNS1AP54105 237 aaKnown RBP12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 AQP5P55064 265 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 WNT3P56703 355 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 KCNJ2P63252 427 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PSPHP78330 225 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PHC1P78364 1004 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 HSF1Q00613 529 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PSG6Q00889 435 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 ACAD11Q709F0 780 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC44A2Q8IWA5 706 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 SLC34A3Q8N130 599 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 FAM109AQ8N4B1 249 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 TMEM251Q8N6I4 163 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 NUP43Q8NFH3 380 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 OR8J2Q8NGG1 315 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PSMA8Q8TAA3 256 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 OMA1Q96E52 524 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 MARK4Q96L34 752 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 EBF4Q9BQW3 602 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 DOHHQ9BU89 302 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 DEFB127Q9H1M4 99 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 C3orf14Q9HBI5 128 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 ZFP64Q9NPA5 681 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-210ENST00000565966 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms