RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CSNK1DP48730 415 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 HMGA2P52926 109 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 BTG1P62324 171 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 NTHL1P78549 312 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 DOC2AQ14183 400 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 GNA13Q14344 377 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 TFAP2EQ6VUC0 442 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 UBE2R2Q712K3 238 aaPredicted RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 DGLUCYQ7Z3D6 616 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ADAMTS19Q8TE59 1207 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 GEMIN6Q8WXD5 167 aaKnown RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 RFT1Q96AA3 541 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF582Q96NG8 517 aaPredicted RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 IL21Q9HBE4 155 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF304Q9HCX3 659 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 THSD1Q9NS62 852 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 VPS29Q9UBQ0 182 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 FLVCR2Q9UPI3 526 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ZFR2Q9UPR6 939 aaKnown RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 MMP20O60882 483 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 NTN1O95631 604 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 IFNW1P05000 195 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 RAE1P78406 368 aaKnown RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ARHGAP15Q53QZ3 475 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 C3orf38Q5JPI3 329 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 NDUFAF5Q5TEU4 345 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 NCEH1Q6PIU2 408 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 MMP21Q8N119 569 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 OR4F15Q8NGB8 312 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 UFD1Q92890 307 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 BADQ92934 168 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 PTP4A1Q93096 173 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 GPA33Q99795 319 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 CERS4Q9HA82 394 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 LHX3Q9UBR4 397 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 GABRPO00591 440 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 ALDOBP05062 364 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 SOAT1P35610 550 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 TSPAN5P62079 268 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 GINS1Q14691 196 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 SERPINA13PQ6UXR4 307 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 SAMD12Q8N8I0 201 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 KREMEN2Q8NCW0 462 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 OR7G3Q8NG95 312 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 OR4D11Q8NGI4 311 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 GIMAP1Q8WWP7 306 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 ING5Q8WYH8 240 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 MED18Q9BUE0 208 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 SARGQ9BW04 601 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF416Q9BWM5 594 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 TESQ9UGI8 421 aaKnown RBP15.34■□□□□ 0.05
LINC00554-201ENST00000564841 CLCA2Q9UQC9 943 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 EFEMP2O95967 443 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 APOC3P02656 99 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 CTSOP43234 321 aaPredicted RBP15.34■□□□□ 0.05
LINC00554-201ENST00000564841 OR10A3P58181 314 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 RPS7P62081 194 aaKnown RBP15.34■□□□□ 0.05
LINC00554-201ENST00000564841 COX10Q12887 443 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 ILKQ13418 452 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 NFATC2Q13469 925 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 PIN1Q13526 163 aaPredicted RBP15.34■□□□□ 0.05
LINC00554-201ENST00000564841 PRSS53Q2L4Q9 553 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 C12orf73Q69YU5 71 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 ESPNLQ6ZVH7 1005 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 TCEAL8Q8IYN2 117 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 RNFT2Q96EX2 444 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 UQCC2Q9BRT2 126 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 TTYH1Q9H313 450 aaPredicted RBP15.34■□□□□ 0.05
LINC00554-201ENST00000564841 NT5DC2Q9H857 520 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 C1GALT1Q9NS00 363 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 ADAM30Q9UKF2 790 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 BAIAP2Q9UQB8 552 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 TMEM5Q9Y2B1 443 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 PCDHB1Q9Y5F3 818 aa15.34■□□□□ 0.05
LINC00554-201ENST00000564841 FAM74A7A6NL05 159 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 CHURC1-FNTBB4DL54 471 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 MT-ND4P03905 459 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 ANKRD34CP0C6C1 535 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 LIMS3P0CW19 117 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 LIMS4P0CW20 117 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 MYOGP15173 224 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 CD70P32970 193 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 CTNNB1P35222 781 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 CCR2P41597 374 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 GAS1P54826 345 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 MAP4K2Q12851 820 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 FGL2Q14314 439 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 GRIN2CQ14957 1233 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 ETFDHQ16134 617 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 DUSP6Q16828 381 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 FAM74A3Q4VXF1 159 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 HMGB4Q8WW32 186 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 SLC5A11Q8WWX8 675 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 ASB12Q8WXK4 309 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 SCRN2Q96FV2 425 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 SEC22CQ9BRL7 303 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF175Q9Y473 711 aa15.33■□□□□ 0.05
LINC00554-201ENST00000564841 CH25HO95992 272 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 OR56A5P0C7T3 313 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms