RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PNLIPRP2P54317 469 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 NAGLUP54802 743 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 DUSP2Q05923 314 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 ZNF763Q0D2J5 394 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 LTB4RQ15722 352 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 CCDC153Q494R4 210 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 CT45A2Q5DJT8 189 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 ZYG11AQ6WRX3 759 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 PLCZ1Q86YW0 608 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 FAM9CQ8IZT9 166 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 RELL2Q8NC24 303 aaPredicted RBP13.67□□□□□ -0.22
SPG7-210ENST00000564409 RDH11Q8TC12 318 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 NINJ1Q92982 152 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 TMBIM1Q969X1 311 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 EXOSC8Q96B26 276 aaKnown RBP13.67□□□□□ -0.22
SPG7-210ENST00000564409 VSTM2LQ96N03 204 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 UCN2Q96RP3 112 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 TM9SF2Q99805 663 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 SH3GL2Q99962 352 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 ACBD3Q9H3P7 528 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 GSTO2Q9H4Y5 243 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 MID1IP1Q9NPA3 183 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 DNAJB12Q9NXW2 375 aaKnown RBP13.67□□□□□ -0.22
SPG7-210ENST00000564409 SENP1Q9P0U3 644 aa13.67□□□□□ -0.22
SPG7-210ENST00000564409 HIVEP1P15822 2718 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 MED12LQ86YW9 2145 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 FAM221AA4D161 298 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 GOLGA8RI6L899 631 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 TSPAN2O60636 221 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 COQ9O75208 318 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 IFI6P09912 130 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 CHMP24386 653 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 IL12BP29460 328 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 SRD5A2P31213 254 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 DNAJB13P59910 316 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 HMGCS1Q01581 520 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 FLYWCH1Q4VC44 716 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 AAGABQ6PD74 315 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 POMZP3Q6PJE2 187 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 TRIM46Q7Z4K8 759 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 IFNEQ86WN2 208 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 CCNYL1Q8N7R7 359 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 WDSUB1Q8N9V3 476 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 NAXEQ8NCW5 288 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 SIMC1Q8NDZ2 872 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 OR9A2Q8NGT5 310 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 OR14L1PQ8NHC6 308 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 MZB1Q8WU39 189 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 APIPQ96GX9 242 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 TRIB1Q96RU8 372 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 GALNT9Q9HCQ5 603 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 SERHLQ9NQF3 203 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
SPG7-210ENST00000564409 MAPRE3Q9UPY8 281 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 TIMM22Q9Y584 194 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 WIF1Q9Y5W5 379 aa13.66□□□□□ -0.22
SPG7-210ENST00000564409 TTC36A6NLP5 189 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 G3V2L1 256 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 DNAJA1P31689 397 aaKnown RBP13.65□□□□□ -0.22
SPG7-210ENST00000564409 HTR6P50406 440 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 ZNF136P52737 540 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 SORDQ00796 357 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 DAZAP2Q15038 168 aaPredicted RBP13.65□□□□□ -0.22
SPG7-210ENST00000564409 IMPG1Q17R60 797 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 CYP27C1Q4G0S4 372 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 CFAP157Q5JU67 520 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 FAM180BQ6P0A1 224 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 FRMD7Q6ZUT3 714 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 IKBIPQ70UQ0 350 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 LARP4Q71RC2 724 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPG7-210ENST00000564409 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 YRDCQ86U90 279 aaKnown RBP13.65□□□□□ -0.22
SPG7-210ENST00000564409 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 ZZZ3Q8IYH5 903 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPG7-210ENST00000564409 RNF138Q8WVD3 245 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPG7-210ENST00000564409 KAT2AQ92830 837 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 ADOQ96SZ5 270 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.22
SPG7-210ENST00000564409 EPB41L4BQ9H329 900 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 FOLH1BQ9HBA9 442 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 MIEF1Q9NQG6 463 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 SDHAF3Q9NRP4 125 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 TAS2R10Q9NYW0 307 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 TBK1Q9UHD2 729 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 AKAP6Q13023 2319 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 C2CD3Q4AC94 2353 aa13.65□□□□□ -0.22
SPG7-210ENST00000564409 KIAA1549Q9HCM3 1950 aa13.64□□□□□ -0.23
SPG7-210ENST00000564409 H0Y3Z8 333 aa13.64□□□□□ -0.23
SPG7-210ENST00000564409 PLOD2O00469 737 aa13.64□□□□□ -0.23
SPG7-210ENST00000564409 CRCPO75575 148 aa13.64□□□□□ -0.23
SPG7-210ENST00000564409 RSL1D1O76021 490 aaKnown RBP13.64□□□□□ -0.23
SPG7-210ENST00000564409 PROCP04070 461 aa13.64□□□□□ -0.23
SPG7-210ENST00000564409 FAM153BP0C7A2 387 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms