RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 HOMER3Q9NSC5 361 aa4.79□□□□□ -1.64
AC055855.3-201ENST00000564269 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
AC055855.3-201ENST00000564269 SLC17A6Q9P2U8 582 aa4.79□□□□□ -1.64
AC055855.3-201ENST00000564269 SLC6A5Q9Y345 797 aa4.79□□□□□ -1.64
AC055855.3-201ENST00000564269 IKBKGQ9Y6K9 419 aa4.79□□□□□ -1.64
AC055855.3-201ENST00000564269 SCN2AQ99250 2005 aa4.79□□□□□ -1.64
AC055855.3-201ENST00000564269 ACANP16112 2415 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 RTCAO00442 366 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TAPBPO15533 448 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 FGF17O60258 216 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 SMPD2O60906 423 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 BANF1O75531 89 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TRAPPC6AO75865 159 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 SCELO95171 688 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TTC4O95801 387 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CLPSP04118 112 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 COX7A2P14406 83 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ZNF37AP17032 561 aaPredicted RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CD22P20273 847 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 HIST1H1TP22492 207 aaPredicted RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ATP5A1P25705 553 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 SERPINB3P29508 390 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CXCR5P32302 372 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 HPDP32754 393 aaPredicted RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 GGT5P36269 586 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 MSH2P43246 934 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CDK9P50750 372 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 NAGLUP54802 743 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 SLC37A1P57057 533 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 PPP2R2BQ00005 443 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 BIKQ13323 160 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 NFYCQ13952 458 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TSNQ15631 228 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 EIPR1Q53HC9 387 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 SPANXN3Q5MJ09 141 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 KANK2Q63ZY3 851 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 FAM45BPQ6NSW5 357 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 YTHDF3Q7Z739 585 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ADGRE4PQ86SQ3 457 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 LUZP2Q86TE4 346 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ACOT4Q8N9L9 421 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 BBOF1Q8ND07 529 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 C7orf57Q8NEG2 295 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 GABPB2Q8TAK5 448 aaPredicted RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 FAM45AQ8TCE6 357 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ZPLD1Q8TCW7 415 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 DOK4Q8TEW6 326 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ANKRD49Q8WVL7 239 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 PIGTQ969N2 578 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 WDR34Q96EX3 536 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 PTCD3Q96EY7 689 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CERS2Q96G23 380 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 RBM18Q96H35 190 aaKnown RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 FBXL20Q96IG2 436 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ZNF597Q96LX8 424 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 DGAT2Q96PD7 388 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 EGFL8Q99944 293 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TMEM79Q9BSE2 394 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TBCDQ9BTW9 1192 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 BTBD2Q9BX70 525 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CAPS2Q9BXY5 557 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 UGT2B28Q9BY64 529 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 ANGPTL4Q9BY76 406 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 WWTR1Q9GZV5 400 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 EHD1Q9H4M9 534 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 COPS7BQ9H9Q2 264 aaPredicted RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 GPRC5BQ9NZH0 403 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 TRPS1Q9UHF7 1281 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CORO1CQ9ULV4 474 aaPredicted RBP4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 CAMK2AQ9UQM7 478 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 C15orf41Q9Y2V0 281 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 OARD1Q9Y530 152 aa4.78□□□□□ -1.64
AC055855.3-201ENST00000564269 IQANK1A0A1B0GTG1 560 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 NCF1BA6NI72 391 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 OR6C76A6NM76 312 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 WASHC1A8K0Z3 465 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 NCF1CA8MVU1 366 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 A8MXE2 369 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 DEFB108AA8MXU0 73 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CES2O00748 559 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SCDO00767 359 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TP53I11O14683 189 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CASKO14936 926 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CLGNO14967 610 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 GSTA4O15217 222 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CTIFO43310 598 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ERN1O75460 977 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CRLF1O75462 422 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 PRKRAO75569 313 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 RCBTB2O95199 551 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SNX4O95219 450 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TMIGD3P0DMS9 266 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 NCF1P14598 390 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CPN1P15169 458 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 NAT1P18440 290 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 EPORP19235 508 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CPN2P22792 545 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 MSX2P35548 267 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CASP3P42574 277 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CASP2P42575 452 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms