RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 PLD6Q8N2A8 252 aaKnown RBP18.95■□□□□ 0.62
HERC2-204ENST00000563945 GBP7Q8N8V2 638 aaPredicted RBP18.95■□□□□ 0.62
HERC2-204ENST00000563945 CNEP1R1Q8N9A8 125 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 OR4K17Q8NGC6 315 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 ADOQ96SZ5 270 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 BRF2Q9HAW0 419 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 ZBTB26Q9HCK0 441 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 FARSBQ9NSD9 589 aaKnown RBP18.95■□□□□ 0.62
HERC2-204ENST00000563945 GIMAP4Q9NUV9 329 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 CLCF1Q9UBD9 225 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 WIF1Q9Y5W5 379 aa18.95■□□□□ 0.62
HERC2-204ENST00000563945 A0A1W2PNV4 684 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 CRHP06850 196 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 INHBAP08476 426 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 DPP4P27487 766 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 EMDP50402 254 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 PSPHP78330 225 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 MRPS35P82673 323 aaKnown RBP18.94■□□□□ 0.62
HERC2-204ENST00000563945 OR5M10Q6IEU7 315 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 FAM180BQ6P0A1 224 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 LARP4Q71RC2 724 aaKnown RBP eCLIP18.94■□□□□ 0.62
HERC2-204ENST00000563945 CCDC116Q8IYX3 515 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 SAMD14Q8IZD0 417 aaPredicted RBP18.94■□□□□ 0.62
HERC2-204ENST00000563945 C1orf52Q8N6N3 182 aaKnown RBP18.94■□□□□ 0.62
HERC2-204ENST00000563945 SIMC1Q8NDZ2 872 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 CTHRC1Q96CG8 243 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 SLC39A3Q9BRY0 314 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 XPR1Q9UBH6 696 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 FBXL2Q9UKC9 423 aa18.94■□□□□ 0.62
HERC2-204ENST00000563945 GPR55Q9Y2T6 319 aaPredicted RBP18.94■□□□□ 0.62
HERC2-204ENST00000563945 MRPS18CQ9Y3D5 142 aaKnown RBP18.94■□□□□ 0.62
HERC2-204ENST00000563945 PEPDP12955 493 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 FPR1P21462 350 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 KCNJ5P48544 419 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 EEFSECP57772 596 aaKnown RBP18.93■□□□□ 0.62
HERC2-204ENST00000563945 GALNT1Q10472 559 aaPredicted RBP18.93■□□□□ 0.62
HERC2-204ENST00000563945 BCL2A1Q16548 175 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 Q5PR19 223 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 MEIOBQ8N635 442 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 CNRIP1Q96F85 164 aaPredicted RBP18.93■□□□□ 0.62
HERC2-204ENST00000563945 SLC35A4Q96G79 324 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 PIP5K1AQ99755 562 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 MED18Q9BUE0 208 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 C6orf203Q9P0P8 240 aaPredicted RBP18.93■□□□□ 0.62
HERC2-204ENST00000563945 SENP1Q9P0U3 644 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 VPS29Q9UBQ0 182 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 NFU1Q9UMS0 254 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 OR10H1Q9Y4A9 318 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 TESMINQ9Y4I5 508 aa18.93■□□□□ 0.62
HERC2-204ENST00000563945 SLC22A20A6NK97 555 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 HEXAP06865 529 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 COL6A2P12110 1019 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 ZNF708P17019 499 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 GRK2P25098 689 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 CD79BP40259 229 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 SERPINB9P50453 376 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 CDH13P55290 713 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 FAM27E3Q08E93 113 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 CXorf67Q86X51 503 aaPredicted RBP18.92■□□□□ 0.62
HERC2-204ENST00000563945 UBQLNLQ8IYU4 475 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 LRRC75A-AS1Q8N1F1 130 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 ZNF675Q8TD23 568 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 NUDT8Q8WV74 236 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 ZNF592Q92610 1267 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 KAT2AQ92830 837 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 ERP27Q96DN0 273 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 PIK3IP1Q96FE7 263 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 PGM2Q96G03 612 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 MRPL57Q9BQC6 102 aaKnown RBP18.92■□□□□ 0.62
HERC2-204ENST00000563945 G6PC3Q9BUM1 346 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 BDH2Q9BUT1 245 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 ACSS3Q9H6R3 686 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 KLHL28Q9NXS3 571 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 MED12LQ86YW9 2145 aa18.92■□□□□ 0.62
HERC2-204ENST00000563945 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 GNG14A0A1W2PPG7 69 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 A0A1W2PPR1 153 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 CTIFO43310 598 aaKnown RBP18.91■□□□□ 0.62
HERC2-204ENST00000563945 TNFSF13O75888 250 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 TGM6O95932 706 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 KRT6AP02538 564 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 KRT6BP04259 564 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 TSPAN8P19075 237 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 KRT6CP48668 564 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 PNLIPRP2P54317 469 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 DSCR4P56555 118 aaPredicted RBP18.91■□□□□ 0.62
HERC2-204ENST00000563945 CLDN18P56856 261 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 DUSP2Q05923 314 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 TEX35Q5T0J7 233 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 EXOSC8Q96B26 276 aaKnown RBP18.91■□□□□ 0.62
HERC2-204ENST00000563945 ZNF681Q96N22 645 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 WFIKKN1Q96NZ8 548 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 BTBD9Q96Q07 612 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 MRPL46Q9H2W6 279 aaKnown RBP18.91■□□□□ 0.62
HERC2-204ENST00000563945 UBTD1Q9HAC8 227 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 SDHAF3Q9NRP4 125 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 PPP4R1LQ9P1A2 415 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 TRPS1Q9UHF7 1281 aa18.91■□□□□ 0.62
HERC2-204ENST00000563945 MCM8Q9UJA3 840 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms