RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 KRT6BP04259 564 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 SERPINE1P05121 402 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 GRK2P25098 689 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 HMOX2P30519 316 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 KRT6CP48668 564 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 DIO3P55073 304 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 RAB38P57729 211 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 TGM3Q08188 693 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 TBL3Q12788 808 aaKnown RBP14.47□□□□□ -0.09
RNF40-205ENST00000563909 DDX39BQ13838 428 aaKnown RBP14.47□□□□□ -0.09
RNF40-205ENST00000563909 RCAN2Q14206 197 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 RCN2Q14257 317 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 CHI3L2Q15782 390 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 MPEG1Q2M385 716 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 PIGGQ5H8A4 983 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 FRG2Q64ET8 278 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 ZCCHC23Q6ZST2 131 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 BTLAQ7Z6A9 289 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 TRIM42Q8IWZ5 723 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 CDYL2Q8N8U2 506 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 FAM47BQ8NA70 645 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 FAM13CQ8NE31 585 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 SRFBP1Q8NEF9 429 aaKnown RBP14.47□□□□□ -0.09
RNF40-205ENST00000563909 OR6Y1Q8NGX8 325 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 HUS1BQ8NHY5 278 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 GAL3ST3Q96A11 431 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 FRG2BQ96QU4 278 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 UGT2B28Q9BY64 529 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 PIGMQ9H3S5 423 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 LRTM1Q9HBL6 345 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 MED4Q9NPJ6 270 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 CNIH4Q9P003 139 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 ROS1P08922 2347 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 TMEM114B3SHH9 223 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 SNUPNO95149 360 aaKnown RBP14.46□□□□□ -0.09
RNF40-205ENST00000563909 RCBTB2O95199 551 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 TGFB1P01137 390 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 TNNI3P19429 210 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 PTX3P26022 381 aaPredicted RBP14.46□□□□□ -0.09
RNF40-205ENST00000563909 ADPRMQ3LIE5 342 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 TMEM35AQ53FP2 167 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 ARL13AQ5H913 290 aaPredicted RBP14.46□□□□□ -0.09
RNF40-205ENST00000563909 DCST1Q5T197 706 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 ADNP2Q6IQ32 1131 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 ZNF595Q8IYB9 648 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 OR14A16Q8NHC5 309 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 SELENOMQ8WWX9 145 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 SPACA9Q96E40 222 aaPredicted RBP14.46□□□□□ -0.09
RNF40-205ENST00000563909 MTERF1Q99551 399 aaKnown RBP14.46□□□□□ -0.09
RNF40-205ENST00000563909 TM9SF2Q99805 663 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 CENPKQ9BS16 269 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 DOHHQ9BU89 302 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 BEX2Q9BXY8 128 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 MS4A8Q9BY19 250 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 PLA2G12AQ9BZM1 189 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 REXO4Q9GZR2 422 aaKnown RBP14.46□□□□□ -0.09
RNF40-205ENST00000563909 PACSIN3Q9UKS6 424 aa14.46□□□□□ -0.09
RNF40-205ENST00000563909 CR1P17927 2039 aa14.46□□□□□ -0.1
RNF40-205ENST00000563909 FREM3P0C091 2139 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 A0A088AWK7 358 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 SYNDIG1LA6NDD5 238 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 MANBAO00462 879 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ERI3O43414 337 aaKnown RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 B3GALT2O43825 422 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ULK1O75385 1050 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 UROSP10746 265 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 CYP4B1P13584 511 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ZNF10P21506 573 aaPredicted RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 BGNP21810 368 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 LOXP28300 417 aaPredicted RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 HNRNPH1P31943 449 aaKnown RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 SOX18P35713 384 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 NEK2P51955 445 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ABCE1P61221 599 aaKnown RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 RPS13P62277 151 aaKnown RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 STX3Q13277 289 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 NHSL2Q5HYW2 709 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 DEPDC1Q5TB30 811 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 KHDRBS2Q5VWX1 349 aaKnown RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 TRIM40Q6P9F5 258 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 GCNT2Q8N0V5 402 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 OR2L5Q8NG80 312 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 OR10G3Q8NGC4 313 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 RAB3IL1Q8TBN0 382 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 SLC22A8Q8TCC7 542 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ZPLD1Q8TCW7 415 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 MS4A6EQ96DS6 147 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ZC3HAV1LQ96H79 300 aaKnown RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 MARK4Q96L34 752 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ZFP3Q96NJ6 502 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 SERPINI1Q99574 410 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 SHCBP1LQ9BZQ2 653 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 ROGDIQ9GZN7 287 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 BRF2Q9HAW0 419 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 NMRK1Q9NWW6 199 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 VTI1BQ9UEU0 232 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 CHCHD2Q9Y6H1 151 aaPredicted RBP14.45□□□□□ -0.1
RNF40-205ENST00000563909 SVEP1Q4LDE5 3571 aa14.45□□□□□ -0.1
RNF40-205ENST00000563909 TENM1Q9UKZ4 2725 aa14.44□□□□□ -0.1
RNF40-205ENST00000563909 HEATR5AQ86XA9 2040 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms