RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ERP27Q96DN0 273 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 VSTM2LQ96N03 204 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 PRDM14Q9GZV8 571 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 PPCSQ9HAB8 311 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 RRAGDQ9NQL2 400 aaPredicted RBP16.12■□□□□ 0.17
NME3-205ENST00000563854 TAS2R9Q9NYW1 312 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 PTGDR2Q9Y5Y4 395 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 FREM3P0C091 2139 aa16.12■□□□□ 0.17
NME3-205ENST00000563854 INTS1Q8N201 2190 aaKnown RBP16.11■□□□□ 0.17
NME3-205ENST00000563854 ARHGAP21Q5T5U3 1957 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 SERTM1A2A2V5 107 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 OR6C70A6NIJ9 312 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 H3BQF6 201 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 DVL2O14641 736 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 COQ9O75208 318 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 RSL1D1O76021 490 aaKnown RBP16.11■□□□□ 0.17
NME3-205ENST00000563854 ZWINTO95229 277 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 EPPINO95925 133 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 IL2RAP01589 272 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 CT45A8P0DMV1 189 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 CT45A9P0DMV2 189 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 CAPN3P20807 821 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 DLX5P56178 289 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 DNAJB13P59910 316 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 NAA20P61599 178 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 SRYQ05066 204 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 SNTA1Q13424 505 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 PRSS53Q2L4Q9 553 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 CT45A2Q5DJT8 189 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 LIPMQ5VYY2 423 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 CES4AQ5XG92 561 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 OR5M10Q6IEU7 315 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 TMEM81Q6P7N7 255 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 TDRPQ86YL5 185 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 C10orf107Q8IVU9 208 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 RELL2Q8NC24 303 aaPredicted RBP16.11■□□□□ 0.17
NME3-205ENST00000563854 OR2W6PQ8NHA6 318 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 C11orf24Q96F05 449 aaPredicted RBP16.11■□□□□ 0.17
NME3-205ENST00000563854 IQCGQ9H095 443 aaKnown RBP16.11■□□□□ 0.17
NME3-205ENST00000563854 MYNNQ9NPC7 610 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 OXSMQ9NWU1 459 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 KCNN3Q9UGI6 736 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 WIF1Q9Y5W5 379 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 POLQO75417 2590 aa16.11■□□□□ 0.17
NME3-205ENST00000563854 ABCB7O75027 752 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 SEC22BO75396 215 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 UROSP10746 265 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 AGFG1P52594 562 aaKnown RBP16.1■□□□□ 0.17
NME3-205ENST00000563854 EFR3AQ14156 821 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 RCAN2Q14206 197 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 SF3B4Q15427 424 aaKnown RBP eCLIP16.1■□□□□ 0.172e-10■■■■■ 29.7
NME3-205ENST00000563854 FAM71E1Q6IPT2 247 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 NOXRED1Q6NXP6 359 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 TRIM46Q7Z4K8 759 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 WDSUB1Q8N9V3 476 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 OR4N2Q8NGD1 307 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 GFM2Q969S9 779 aaKnown RBP16.1■□□□□ 0.17
NME3-205ENST00000563854 SLC35A4Q96G79 324 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 WDYHV1Q96HA8 205 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 DDX18Q9NVP1 670 aaKnown RBP16.1■□□□□ 0.17
NME3-205ENST00000563854 SIRT5Q9NXA8 310 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 MID2Q9UJV3 735 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 DKKL1Q9UK85 242 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 EXO1Q9UQ84 846 aaKnown RBP16.1■□□□□ 0.17
NME3-205ENST00000563854 L3MBTL1Q9Y468 752 aa16.1■□□□□ 0.17
NME3-205ENST00000563854 TEP1Q99973 2627 aaKnown RBP16.09■□□□□ 0.17
NME3-205ENST00000563854 MYO1GB0I1T2 1018 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 H0Y3Z8 333 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 SCO2O43819 266 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 PLOD3O60568 738 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 TSPAN2O60636 221 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 CBR3O75828 277 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 ACTL6AO96019 429 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 CYP4B1P13584 511 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 RFX3P48380 749 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 PCLAFQ15004 111 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 CEBPEQ15744 281 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 NHSL2Q5HYW2 709 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 NSUN5P2Q63ZY6 315 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 ANKRD26P1Q6NSI1 321 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 ARSKQ6UWY0 536 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 IFNEQ86WN2 208 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 PLCZ1Q86YW0 608 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 ZZZ3Q8IYH5 903 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 NTNG2Q96CW9 530 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 OR2B2Q9GZK3 357 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 STMN4Q9H169 189 aaPredicted RBP16.09■□□□□ 0.17
NME3-205ENST00000563854 GLIPR2Q9H4G4 154 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 LRTM1Q9HBL6 345 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 SLC24A3Q9HC58 644 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 TAS2R10Q9NYW0 307 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 FBXL2Q9UKC9 423 aa16.09■□□□□ 0.17
NME3-205ENST00000563854 C17orf51A8MQB3 221 aa16.08■□□□□ 0.16
NME3-205ENST00000563854 EEF1E1-BLOC1S5C9J1V9 151 aa16.08■□□□□ 0.16
NME3-205ENST00000563854 EEF1E1O43324 174 aaKnown RBP16.08■□□□□ 0.16
NME3-205ENST00000563854 RGS14O43566 566 aa16.08■□□□□ 0.16
NME3-205ENST00000563854 GRK2P25098 689 aa16.08■□□□□ 0.16
NME3-205ENST00000563854 CEACAM8P31997 349 aaPredicted RBP16.08■□□□□ 0.16
NME3-205ENST00000563854 ASCL1P50553 236 aa16.08■□□□□ 0.16
NME3-205ENST00000563854 ZNF136P52737 540 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms