RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PDZD2O15018 2839 aa13.54□□□□□ -0.24
RPUSD1-204ENST00000563560 PKDREJQ9NTG1 2253 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ATP6AP2A0A1C7CYW4 349 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 OR14I1A6ND48 311 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 CAPN14A8MX76 684 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ACOT7O00154 380 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 TP53I11O14683 189 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 CDC40O60508 579 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 HCN1O60741 890 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ATP6AP2O75787 350 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 SNX4O95219 450 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ZWINTO95229 277 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 CHEK2O96017 543 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 HPNP05981 417 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ABOP16442 354 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 BGNP21810 368 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 GRNP28799 593 aaKnown RBP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 PTPN6P29350 595 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 DCTP40126 519 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 NRG3P56975 720 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ABCE1P61221 599 aaKnown RBP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 SNTA1Q13424 505 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 ART3Q13508 389 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 PTGR1Q14914 329 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 GALNTL6Q49A17 601 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 RPTNQ6XPR3 784 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 C3P1Q6ZMU1 363 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 MTERF4Q7Z6M4 381 aaKnown RBP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 MRGPRGQ86SM5 289 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 TMBIM1Q969X1 311 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 MTERF3Q96E29 417 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 BBS4Q96RK4 519 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 LMF2Q9BU23 707 aaKnown RBP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 DOHHQ9BU89 302 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 PNPLA3Q9NST1 481 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 SIRT3Q9NTG7 399 aaPredicted RBP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 NOTCH2Q04721 2471 aa13.53□□□□□ -0.24
RPUSD1-204ENST00000563560 DOCK7Q96N67 2140 aa13.52□□□□□ -0.24
RPUSD1-204ENST00000563560 WDR91A4D1P6 747 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 SCAMP2O15127 329 aaKnown RBP13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 ICOSLGO75144 302 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 PEX11AO75192 247 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 SKAP2O75563 359 aaPredicted RBP13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 CDK9P50750 372 aaKnown RBP13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 KCNJ2P63252 427 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 PLCXD2Q0VAA5 305 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 SLC10A1Q14973 349 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 MLC1Q15049 377 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 TIGD3Q6B0B8 471 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 ZNF787Q6DD87 383 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 MTFR2Q6P444 385 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 DDIASQ8IXT1 998 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 PSMA8Q8TAA3 256 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 COQ8BQ96D53 544 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 ZNF597Q96LX8 424 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 PPP3R2Q96LZ3 170 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 GALNT9Q9HCQ5 603 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 PFDN4Q9NQP4 134 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 ACSS1Q9NUB1 689 aaPredicted RBP13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 TNFRSF10DQ9UBN6 386 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 BOKQ9UMX3 212 aaPredicted RBP13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 KLF2Q9Y5W3 355 aaPredicted RBP13.52□□□□□ -0.25
RPUSD1-204ENST00000563560 TMEM120BA0PK00 339 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 C17orf51A8MQB3 221 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 PRRG2O14669 202 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 SNPHO15079 494 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 ANKRD28O15084 1053 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 PDPK1O15530 556 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 AKAP10O43572 662 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 FADS1O60427 444 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 SNNO75324 88 aaPredicted RBP13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 TPOP07202 933 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 GRK2P25098 689 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 NTSP30990 170 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 ASMTP46597 345 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 PSPHP78330 225 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 CRYZQ08257 329 aaKnown RBP13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 BST1Q10588 318 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 GAB1Q13480 694 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 SMU1Q2TAY7 513 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 GXYLT1Q4G148 440 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 NHSL2Q5HYW2 709 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 SLC30A6Q6NXT4 461 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 WDR53Q7Z5U6 358 aaPredicted RBP13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 CAMKMTQ7Z624 323 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 LIX1Q8N485 282 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 OR7A2PQ8NGA2 310 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 NEIL3Q8TAT5 605 aa13.51□□□□□ -0.25
RPUSD1-204ENST00000563560 COL21A1Q96P44 957 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms