RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 BTBD9Q96Q07 612 aa14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 MRPL1Q9BYD6 325 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 NOL11Q9H8H0 719 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 UBTD1Q9HAC8 227 aa14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 NMRK1Q9NWW6 199 aa14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 KLHL28Q9NXS3 571 aa14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 GPR55Q9Y2T6 319 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-205ENST00000562914 JMJD1CQ15652 2540 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 HIVEP2P31629 2446 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 C16orf97H3BN30 126 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 OR7A17O14581 309 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 SIAH2O43255 324 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 EMC8O43402 210 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 TNFRSF21O75509 655 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 ERAL1O75616 437 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 REM1O75628 298 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 CD8BP10966 210 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 PAX1P15863 534 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 DPP4P27487 766 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 EMDP50402 254 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 DSCR4P56555 118 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 EXOSC7Q15024 291 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 DESI1Q6ICB0 168 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 COMMD6Q7Z4G1 85 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 CNEP1R1Q8N9A8 125 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 FBF1Q8TES7 1133 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 TMBIM1Q969X1 311 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 KLHL29Q96CT2 875 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 PERPQ96FX8 193 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 NAPGQ99747 312 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 DPH5Q9H2P9 285 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 ELOVL6Q9H5J4 265 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 BRF2Q9HAW0 419 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 EHD3Q9NZN3 535 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 TRPS1Q9UHF7 1281 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 FBXL2Q9UKC9 423 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 ZNF175Q9Y473 711 aa14.24□□□□□ -0.13
HERPUD1-205ENST00000562914 A0A096LPK6 155 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 LRRC14BA6NHZ5 514 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 STX16-NPEPL1H3BU86 382 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 STX16O14662 325 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 SIX3O95343 332 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 PPP3CBP16298 524 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 GRK2P25098 689 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 KCNJ5P48544 419 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 PNLIPRP2P54317 469 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 IRF9Q00978 393 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 GANABQ14697 944 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 TRMT12Q53H54 448 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 ZNF474Q6S9Z5 364 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 PLEKHM3Q6ZWE6 761 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 MILR1Q7Z6M3 343 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 OR52B6Q8NGF0 335 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 RNF138Q8WVD3 245 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 ZNF845Q96IR2 970 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 MARK4Q96L34 752 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 CDK15Q96Q40 435 aa14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 CPSF2Q9P2I0 782 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-205ENST00000562914 ARID1AO14497 2285 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 INAFM1C9JVW0 142 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 ZIC3O60481 467 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 TSPAN2O60636 221 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 CNOT4O95628 575 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 ALDOAP04075 364 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 RBP1P09455 135 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 FCGR2AP12318 317 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 IL12BP29460 328 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 TYK2P29597 1187 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 MAGEA4P43358 317 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 KIR2DL2P43627 348 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 PTH2RP49190 550 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 GNG11P61952 73 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 ERCC6LQ2NKX8 1250 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 MROH9Q5TGP6 573 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 VWA1Q6PCB0 445 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 PLXDC2Q6UX71 529 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 BTLAQ7Z6A9 289 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 MED12LQ86YW9 2145 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 PTGR2Q8N8N7 351 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 OR4K17Q8NGC6 315 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 TM4SF18Q96CE8 201 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 ZNF681Q96N22 645 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 GPR78Q96P69 363 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 ADOQ96SZ5 270 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 SHCBP1LQ9BZQ2 653 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 CXorf56Q9H5V9 222 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 RNF122Q9H9V4 155 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 FANCFQ9NPI8 374 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 SDHAF3Q9NRP4 125 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 GRHL1Q9NZI5 618 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 SNX6Q9UNH7 406 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 SLC12A4Q9UP95 1085 aa14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 UTP11Q9Y3A2 253 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-205ENST00000562914 TRIM64A6NGJ6 449 aa14.21□□□□□ -0.13
HERPUD1-205ENST00000562914 TRIM64BA6NI03 449 aa14.21□□□□□ -0.13
HERPUD1-205ENST00000562914 CGAP01215 116 aa14.21□□□□□ -0.13
HERPUD1-205ENST00000562914 CT45A8P0DMV1 189 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms