RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 OBSL1O75147 1896 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 KDM4EB2RXH2 506 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 FRS3O43559 492 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC19A2O60779 497 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 TBX19O60806 448 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 PQBP1O60828 265 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 LILRB5O75023 590 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 NTN1O95631 604 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 EPPINO95925 133 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 FGBP02675 491 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 ALPPL2P10696 532 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 ELK1P19419 428 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 PKLRP30613 574 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 WASH2PQ6VEQ5 465 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 PARS2Q7L3T8 475 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 KLBQ86Z14 1044 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 ARIH2OSQ8N7S6 290 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 BBS10Q8TAM1 723 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 IRF7Q92985 503 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 CREB3L1Q96BA8 519 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 COQ7Q99807 217 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 GLIPR2Q9H4G4 154 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 NCKAP1Q9Y2A7 1128 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 CPSF4LA6NMK7 179 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 H7BY64 318 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 MEN1O00255 615 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 CHRM4P08173 479 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 GNSP15586 552 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 SYN1P17600 705 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 KHKP50053 298 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 NCBP2P52298 156 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 AGFG1P52594 562 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 FAM205BPQ63HN1 556 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 ANKRD54Q6NXT1 300 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 FAM83HQ6ZRV2 1179 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 NRSN1Q8IZ57 195 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TTC9Q92623 222 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 DTD2Q96FN9 168 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 ART5Q96L15 291 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 PRAP1Q96NZ9 151 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 BBS4Q96RK4 519 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 SECISBP2Q96T21 854 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TEX12Q9BXU0 123 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 BTBD1Q9H0C5 482 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 MED28Q9H204 178 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 H2AFY2Q9P0M6 372 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TSPAN11A1L157 253 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 GLOD5A6NK44 160 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 FABP7O15540 132 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TGM5O43548 720 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 ACP5P13686 325 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 KELP23276 732 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 CFL1P23528 166 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TALDO1P37837 337 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 FRKP42685 505 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 ATP12AP54707 1039 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TSPAN31Q12999 210 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 GPR176Q14439 515 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 LY6G5CQ5SRR4 150 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 TIGD4Q8IY51 512 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 AMER3Q8N944 861 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF485Q8NCK3 441 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 RGMAQ96B86 450 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 RHBGQ9H310 441 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 ACSS1Q9NUB1 689 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
VPS9D1-202ENST00000561976 NDUFS4O43181 175 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 EFCAB14O75071 495 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ERAL1O75616 437 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 PSMB5P28074 263 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ACADLP28330 430 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF155Q12901 538 aaPredicted RBP13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 RIN1Q13671 783 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ESCO2Q56NI9 601 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 BCL2L15Q5TBC7 163 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ADCK2Q7Z695 626 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF547Q8IVP9 402 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 LRRC17Q8N6Y2 441 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 POGLUT1Q8NBL1 392 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 LHX9Q9NQ69 397 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 MAT2BQ9NZL9 334 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ZFR2Q9UPR6 939 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 POLHQ9Y253 713 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 A0A1B0GVC2 190 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 A6NIN4 97 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 DVL2O14641 736 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 OR1F1O43749 312 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 PAHP00439 452 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 TRIM23P36406 574 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 CCR8P51685 355 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 ANGPT1Q15389 498 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 FCN2Q15485 313 aa13.12□□□□□ -0.31
VPS9D1-202ENST00000561976 WDR45BQ5MNZ6 344 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms