RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 POMT2Q9UKY4 750 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 C19orf53Q9UNZ5 99 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 CHST2Q9Y4C5 530 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TMEM131Q92545 1883 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 B4DGG1 531 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 M0R3G1 203 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 CYR61O00622 381 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 FRS3O43559 492 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 FGF17O60258 216 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 FCMRO60667 390 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ATP1B1P05026 303 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 PIPP12273 146 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 ALDH4A1P30038 563 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SLC15A1P46059 708 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 BMXP51813 675 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 VSX2P58304 361 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 NCS1P62166 190 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SHC2P98077 582 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 OCA2Q04671 838 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TDGQ13569 410 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 DUSP5Q16690 384 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 C11orf91Q3C1V1 193 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ARHGAP11BQ3KRB8 267 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 CASP12Q6UXS9 341 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZNF438Q7Z4V0 828 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 FAM160A2Q8N612 972 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 TMEM52Q8NDY8 209 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 OR5T3Q8NGG3 340 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 CRELD1Q96HD1 420 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ABHD8Q96I13 439 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 Q96MT0 163 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 IL4I1Q96RQ9 567 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 CCDC3Q9BQI4 270 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TPSD1Q9BZJ3 242 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 LMAN1LQ9HAT1 526 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SLC25A19Q9HC21 320 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 KLHL28Q9NXS3 571 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 A0A087WV62 115 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 IGHV1OR15-9A0A0B4J2B8 117 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 LDB3O75112 727 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 ENTPD6O75354 484 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 ZNF217O75362 1048 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 CYP7B1O75881 506 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 GPR75O95800 540 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 PTHP01270 115 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 ST6GAL1P15907 406 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 TYRP1P17643 537 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 TNNI3P19429 210 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 GSTM3P21266 225 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 COL9A2Q14055 689 aaPredicted RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 TRAM2Q15035 370 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 SYT16Q17RD7 645 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 TRMT12Q53H54 448 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 ENTPD8Q5MY95 495 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 TYW3Q6IPR3 259 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 ARHGAP22Q7Z5H3 698 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 SLCO6A1Q86UG4 719 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 SHISA5Q8N114 240 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 OR8J1Q8NGP2 316 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 DIO2Q92813 273 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 RPL3LQ92901 407 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 PRR14Q9BWN1 585 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 CDCA4Q9BXL8 241 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 STARD5Q9NSY2 213 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 MKLN1Q9UL63 735 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 ZNF443Q9Y2A4 671 aaPredicted RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 IFT52Q9Y366 437 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 WDR45Q9Y484 360 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 EYSQ5T1H1 3165 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 CPSF4LA6NMK7 179 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 HCRTR1O43613 425 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 CCNYL3P0C7X3 344 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 NT5EP21589 574 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 AVPR1BP47901 424 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 RGS8P57771 180 aaPredicted RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMG1-205ENST00000561947 GAS6Q14393 721 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 DGUOKQ16854 277 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 EXOSC6Q5RKV6 272 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 PLAG1Q6DJT9 500 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 KLHL35Q6PF15 583 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 ZNF367Q7RTV3 350 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 CLIP4Q8N3C7 705 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 DYNC2LI1Q8TCX1 351 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 LGALS12Q96DT0 336 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 GPA33Q99795 319 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 PIGUQ9H490 435 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 ANKRD19PQ9H560 264 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 UBE2ZQ9H832 354 aaPredicted RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 CACYBPQ9HB71 228 aaKnown RBP9.17□□□□□ -0.94
SMG1-205ENST00000561947 FAM60AQ9NP50 221 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 SEMA4GQ9NTN9 838 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 TBC1D23Q9NUY8 699 aa9.17□□□□□ -0.94
SMG1-205ENST00000561947 A0A087WUU8 490 aa9.16□□□□□ -0.94
SMG1-205ENST00000561947 EFCAB9A8MZ26 197 aa9.16□□□□□ -0.94
SMG1-205ENST00000561947 AP3D1O14617 1153 aa9.16□□□□□ -0.94
SMG1-205ENST00000561947 PLOD3O60568 738 aa9.16□□□□□ -0.94
SMG1-205ENST00000561947 CNOT3O75175 753 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms