RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 NSMCE3Q96MG7 304 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 FCRL4Q96PJ5 515 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 FAM111AQ96PZ2 611 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ZNF347Q96SE7 839 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 C19orf43Q9BQ61 176 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 HDHD5Q9BXW7 423 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 BEX2Q9BXY8 128 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 WWP1Q9H0M0 922 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 RHOJQ9H4E5 214 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 RABEP2Q9H5N1 569 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 C10orf88Q9H8K7 445 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 PLEKHF2Q9H8W4 249 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 NOD2Q9HC29 1040 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 PFDN4Q9NQP4 134 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 C20orf96Q9NUD7 363 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.99□□□□□ -1.93
SPG11-225ENST00000561391 RBM22Q9NW64 420 aaKnown RBP eCLIP2.99□□□□□ -1.93
SPG11-225ENST00000561391 TMEM248Q9NWD8 314 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 HACD3Q9P035 362 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 COX16Q9P0S2 106 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CTNNAL1Q9UBT7 734 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 BCAP29Q9UHQ4 241 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CORO1CQ9ULV4 474 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 NPIPA1Q9UND3 350 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ACOT9Q9Y305 439 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 TTLL3Q9Y4R7 772 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 A0A096LPK6 155 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 ILVBLA1L0T0 632 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 A8MV72 311 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 F5H5T6 163 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 FAM72CH0Y354 149 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 GOLGA8RI6L899 631 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 PPP6CO00743 305 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TLX2O43763 284 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 MGRN1O60291 552 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SNNO75324 88 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 RBMXL2O75526 392 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 TSPAN12O95859 305 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 IGLV3-27P01718 113 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 IGHEP01854 428 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 C1QAP02745 245 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 C9P02748 559 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 UGT2B4P06133 528 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 RBP1P09455 135 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CSF1P09603 554 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 RALBP11234 206 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 NQO1P15559 274 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 STMN1P16949 149 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 HOXB6P17509 224 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 HLA-DPA1P20036 260 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CALB2P22676 271 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 PRPH2P23942 346 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CERS1P27544 350 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 PSMB4P28070 264 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CHRNB4P30926 498 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 OR1E1P30953 314 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 HNRNPH1P31943 449 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 PPARGP37231 505 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 FASLGP48023 281 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CPA2P48052 419 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SERPINH1P50454 418 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 CCNHP51946 323 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 CDH4P55283 916 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 RPL26P61254 145 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 HSF1Q00613 529 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 ZNF91Q05481 1191 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 NIPAL4Q0D2K0 466 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 AIMP2Q13155 320 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 MSLNQ13421 630 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 PEX6Q13608 980 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC1A5Q15758 541 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 FAM83EQ2M2I3 478 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 C5orf22Q49AR2 442 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 FASTKD1Q53R41 847 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 RAB6CQ53S08 254 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 HSP90AA5PQ58FG0 334 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 ZNF805Q5CZA5 627 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CFAP157Q5JU67 520 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 C6orf163Q5TEZ5 329 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 FAM72AQ5TYM5 149 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 LIPNQ5VXI9 398 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 KIAA0930Q6ICG6 404 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 FAM72DQ6L9T8 149 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC18B1Q6NT16 456 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 NEPROQ6NW34 567 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 C22orf39Q6P5X5 142 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CYB5D1Q6P9G0 228 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC2A7Q6PXP3 512 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 PRSS57Q6UWY2 283 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 FAM47EQ6ZV65 393 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 ZNF534Q76KX8 674 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 OTOAQ7RTW8 1153 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 RNF144BQ7Z419 303 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SETD3Q86TU7 594 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 FAM72BQ86X60 149 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC22A9Q8IVM8 553 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 DSELQ8IZU8 1212 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms