RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CBLN4Q9NTU7 201 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.72□□□□□ -1.65
HERC1-213ENST00000561359 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 WWOXQ9NZC7 414 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 GALPQ9UBC7 116 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 GPR52Q9Y2T5 361 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 PMF1-BGLAPU3KQ54 211 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 A0A088AWK7 358 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CTAGE15A4D2H0 777 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 LRP5LA4QPB2 252 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 DPRXA6NFQ7 191 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 VWC2LB2RUY7 222 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 APOC4-APOC2K7ER74 178 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 NDUFS8O00217 210 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CYR61O00622 381 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 ERI3O43414 337 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 SPOPO43791 374 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CDH16O75309 829 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PLGP00747 810 aaPredicted RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 APOC2P02655 101 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 IGKV3-11P04433 115 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 SERPINA6P08185 405 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 NPPBP16860 134 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 ZNF23P17027 643 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PSMB1P20618 241 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 ZNF10P21506 573 aaPredicted RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 CCND1P24385 295 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 ADRA1DP25100 572 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 TTKP33981 857 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 TMED10P49755 219 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 NEK2P51955 445 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PLA2G16P53816 162 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 GFRA1P56159 465 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CTBP2P56545 445 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 EIF3EP60228 445 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 STXBP1P61764 594 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 CUL1Q13616 776 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CSHL1Q14406 222 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PON3Q15166 354 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PARP6Q2NL67 630 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 TTLL9Q3SXZ7 439 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 C11orf71Q6IPW1 123 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PPP4R4Q6NUP7 873 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 TRIM40Q6P9F5 258 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 AGTRAPQ6RW13 159 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 LCTLQ6UWM7 567 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 MBOAT1Q6ZNC8 495 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 LINC00523Q86TU6 105 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CTAGE6Q86UF2 777 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 STK32CQ86UX6 486 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CCDC25Q86WR0 208 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 FBXL14Q8N1E6 418 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 MPP5Q8N3R9 675 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 SVOPLQ8N434 492 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PRELID2Q8N945 189 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 ANKRD53Q8N9V6 530 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 OR4K1Q8NGD4 311 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 OR52K1Q8NGK4 314 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 FNDC9Q8TBE3 224 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 DOK4Q8TEW6 326 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 HSD17B8Q92506 261 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CCT6BQ92526 530 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 SNF8Q96H20 258 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 FOXN4Q96NZ1 517 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 BIRC8Q96P09 236 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 DGAT2Q96PD7 388 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 FAM118BQ9BPY3 351 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 OR2B2Q9GZK3 357 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 WWTR1Q9GZV5 400 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 TSPYL1Q9H0U9 437 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 OR10A4Q9H209 315 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 SPNS1Q9H2V7 528 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 RNF122Q9H9V4 155 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PLSCR4Q9NRQ2 329 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 FBLN5Q9UBX5 448 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 ING1Q9UK53 422 aaPredicted RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 POU2F3Q9UKI9 436 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 RIMKLBQ9ULI2 386 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 PLA2G2DQ9UNK4 145 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 CRYL1Q9Y2S2 319 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 HYOU1Q9Y4L1 999 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.71□□□□□ -1.66
HERC1-213ENST00000561359 BZW2Q9Y6E2 419 aaKnown RBP4.71□□□□□ -1.66
HERC1-213ENST00000561359 BIRC6Q9NR09 4857 aa4.71□□□□□ -1.66
HERC1-213ENST00000561359 hCG_1818297A0A087WSY0 165 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PABPN1LA6NDY0 278 aaKnown RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 SHISA9B4DS77 424 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 H7C417 338 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ABCD4O14678 606 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PFDN6O15212 129 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PIN1P1O15428 100 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PSMD3O43242 534 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 SEC14L5O43304 696 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 CBR3O75828 277 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 METTL18O95568 372 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 SERPING1P05155 500 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 COL6A2P12110 1019 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 KRT15P19012 456 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms